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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4715: 13083 - KOG1730 Thioredoxin-like protein, at 840551 to 841550
13083
mRNA_4716: 13084 - SUPERFAMILY--SSF55753, at 841773 to 842668
13084
mRNA_4717: 13085 - BLAST putative proteasome regulatory subunit 12 [Rhizoctoni..., at 844086 to 846101
13085
mRNA_4718: 13086 - HMMPfam-Thaumatin family-PF00314,PRINTS-Pathogenesis-related protein signature-PR00347,ProSitePatterns-Thaumatin family signature.-PS00316,ProSiteProfiles-Thaumatin family profile.-PS51367,SMART-Thaumatin family-SM00205,SUPERFAMILY--SSF49870, at 846943 to 849026
13086
mRNA_4719: 13087 - K18693 DPP1 diacylglycerol diphosphate phosphatase / phosphatidate phosphatase, at 849310 to 850936
13087
Group
Condition
mRNA_4715
mRNA_4716
mRNA_4717
mRNA_4718
mRNA_4719
13083
13084
13085
13086
13087
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
-3.6
0.1
-0.2
-0.0
auxotrophy
Dropout Complete
-0.9
0.1
-0.3
-0.3
0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
-0.5
-0.2
-0.0
-0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.4
-0.4
-0.2
0.4
auxotrophy
YNB Glucose 75mM Arginine
-0.3
0.3
-0.4
-0.2
0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.1
-0.4
-0.0
0.1
0.0
auxotrophy
YNB Glucose
-0.4
0.4
-0.4
0.0
0.2
ypd buoyancy
40 hrs Low Buoyancy
0.1
-0.2
-0.0
0.1
0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
0.0
0.3
-0.1
-0.0
-0.2
growth on ricinoleic acid
YNB Glucose
0.2
0.4
-0.5
-0.1
0.1
growth on ypd
YPD
0.2
-0.3
0.0
0.1
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.1
-0.2
0.1
0.1
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.1
0.1
0.2
-0.1
-0.1
ypd buoyancy
40 hrs Median Buoyancy
0.3
-0.2
-0.0
0.1
0.1
ypd buoyancy
40 hrs High Buoyancy
0.3
-0.0
-0.2
0.2
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.2
0.0
0.1
0.0
0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.4
0.1
-0.1
0.1
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
0.8
0.0
0.3
-0.1
growth on oleic acid
YNB Oleic Acid
0.2
0.3
0.5
0.0
0.2
growth on oleic acid
YNB Glucose
0.6
0.4
0.1
-0.2
0.4
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
0.6
0.3
0.4
0.1
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