Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4714: 13082 - K01183 E3.2.1.14 chitinase, at 838359 to 840435 13082 mRNA_4715: 13083 - KOG1730 Thioredoxin-like protein, at 840551 to 841550 13083 mRNA_4716: 13084 - SUPERFAMILY--SSF55753, at 841773 to 842668 13084 mRNA_4717: 13085 - BLAST putative proteasome regulatory subunit 12 [Rhizoctoni..., at 844086 to 846101 13085 mRNA_4718: 13086 - HMMPfam-Thaumatin family-PF00314,PRINTS-Pathogenesis-related protein signature-PR00347,ProSitePatterns-Thaumatin family signature.-PS00316,ProSiteProfiles-Thaumatin family profile.-PS51367,SMART-Thaumatin family-SM00205,SUPERFAMILY--SSF49870, at 846943 to 849026 13086
Group Condition mRNA_4714 mRNA_4715 mRNA_4716 mRNA_4717 mRNA_4718
13082
13083
13084
13085
13086
ypd buoyancy 40 hrs No Buoyancy Separation -1.7 -0.5 -3.6 0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.1 -0.4 -0.4 -0.2
auxotrophy Dropout Complete 0.2 -0.9 0.1 -0.3 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 -0.0 -0.5 -0.2 -0.0
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.3 0.3 -0.4 -0.2
auxotrophy YNB Glucose -0.1 -0.4 0.4 -0.4 0.0
ypd buoyancy 40 hrs Low Buoyancy -0.1 0.1 -0.2 -0.0 0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.6 0.4 0.1 -0.1 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 0.1 -0.4 -0.0 0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 0.0 0.3 -0.1 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 0.2 0.0 0.1 0.0
ypd buoyancy 40 hrs Median Buoyancy -0.0 0.3 -0.2 -0.0 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 0.1 0.1 0.2 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 0.1 -0.2 0.1 0.1
growth on ricinoleic acid YNB Glucose 0.3 0.2 0.4 -0.5 -0.1
growth on ypd YPD 0.3 0.2 -0.3 0.0 0.1
ypd buoyancy 40 hrs High Buoyancy 0.1 0.3 -0.0 -0.2 0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.7 -0.0 0.8 0.0 0.3
growth on oleic acid YNB Glucose -0.2 0.6 0.4 0.1 -0.2
growth on oleic acid YNB Oleic Acid 0.2 0.2 0.3 0.5 0.0
facs on lipid accumulation Sorted High BODIPY Gate 0.3 0.1 0.6 0.3 0.4
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