Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4712: 13080 - HMMPfam-N-terminal C2 in EEIG1 and EHBP1 proteins-PF10358, at 830953 to 834055 13080 mRNA_4713: 13081 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 834390 to 838234 13081 mRNA_4714: 13082 - K01183 E3.2.1.14 chitinase, at 838359 to 840435 13082 mRNA_4715: 13083 - KOG1730 Thioredoxin-like protein, at 840551 to 841550 13083 mRNA_4716: 13084 - SUPERFAMILY--SSF55753, at 841773 to 842668 13084
Group Condition mRNA_4712 mRNA_4713 mRNA_4714 mRNA_4715 mRNA_4716
13080
13081
13082
13083
13084
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 -0.5 -1.7 -0.5 -3.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.4 -0.0 -0.0 -0.5
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.6 -0.2 0.0 0.3
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.4 -0.1 0.1 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.1 -0.6 0.4 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.1 -0.1 0.1 0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.0 -0.3 -0.7 -0.0 0.8
auxotrophy YNB Glucose 75mM Methionine 0.7 0.1 -0.3 -0.1 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 0.0 -0.4 0.2 0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 0.1 0.1 0.1 -0.2
auxotrophy Dropout Complete 0.5 0.1 0.2 -0.9 0.1
ypd buoyancy 40 hrs Median Buoyancy -0.0 0.0 -0.0 0.3 -0.2
growth on oleic acid YNB Oleic Acid -0.2 -0.1 0.2 0.2 0.3
ypd buoyancy 40 hrs High Buoyancy 0.2 -0.2 0.1 0.3 -0.0
growth on ypd YPD 0.4 -0.2 0.3 0.2 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid 0.7 -0.0 0.2 0.1 -0.4
auxotrophy YNB Glucose 75mM Arginine 0.5 0.1 -0.1 -0.3 0.3
auxotrophy YNB Glucose 0.7 0.0 -0.1 -0.4 0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.0 0.3 0.1 0.6
growth on oleic acid YNB Glucose 0.4 -0.0 -0.2 0.6 0.4
growth on ricinoleic acid YNB Glucose 0.7 -0.2 0.3 0.2 0.4
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