Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4699: 13067 - K09140 TSR3 pre-rRNA-processing protein TSR3, at 801271 to 802584 13067 mRNA_4700: 13068 - BLAST putative mannoprotein [Rhizoctonia solani 123E], at 802870 to 804709 13068 mRNA_4701: 13069 - HMMPfam-Asp/Glu/Hydantoin racemase-PF01177, at 805189 to 806290 13069 mRNA_4702: 13070 - K00870 E2.7.1.37 protein kinase, at 806488 to 808596 13070 mRNA_4703: 13071 - Hypothetical Protein, at 808810 to 809148 13071
Group Condition mRNA_4699 mRNA_4700 mRNA_4701 mRNA_4702 mRNA_4703
13067
13068
13069
13070
13071
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -1.0 -0.7 0.2 -1.1
growth on ricinoleic acid YNB Glucose -0.9 -0.4 0.1 -0.0 -1.5
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 -0.5 0.0 -0.3 -1.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.1 0.1 0.1 -0.0 -0.7
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 -0.6 -0.5 0.4 -0.5
ypd buoyancy 40 hrs High Buoyancy -0.4 0.3 -0.2 0.1 -0.4
growth on oleic acid YNB Glucose -0.5 -0.8 0.4 0.3 0.2
auxotrophy YNB Glucose -0.0 -0.3 0.0 0.3 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 0.2 -0.1 -0.5 0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.6 -0.1 0.1 -0.0 0.7
auxotrophy Dropout Complete 0.1 -0.2 0.2 0.4 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate 0.4 -0.2 -0.1 0.2 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 0.3 -0.2 -0.0 0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.3 0.1 -0.1 0.0
growth on oleic acid YNB Oleic Acid -0.2 -0.2 0.1 0.4 0.3
auxotrophy YNB Glucose 75mM Methionine 0.0 -0.4 0.2 0.3 0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 0.2 0.7 -0.4 0.4
ypd buoyancy 40 hrs Low Buoyancy -0.3 0.2 0.2 0.4 0.3
auxotrophy YNB Glucose 75mM Arginine 0.3 0.0 0.1 0.4 0.1
growth on ypd YPD 0.6 -0.5 -0.4 0.1 1.2
facs on lipid accumulation Sorted High BODIPY Gate 0.5 0.2 0.6 0.5 -0.0
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