Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4697: 13065 - K05291 PIGS phosphatidylinositol glycan, class S, at 797129 to 800158 13065 mRNA_4698: 13066 - K12193 VPS24, CHMP3 charged multivesicular body protein 3, at 800404 to 801169 13066 mRNA_4699: 13067 - K09140 TSR3 pre-rRNA-processing protein TSR3, at 801271 to 802584 13067 mRNA_4700: 13068 - BLAST putative mannoprotein [Rhizoctonia solani 123E], at 802870 to 804709 13068 mRNA_4701: 13069 - HMMPfam-Asp/Glu/Hydantoin racemase-PF01177, at 805189 to 806290 13069
Group Condition mRNA_4697 mRNA_4698 mRNA_4699 mRNA_4700 mRNA_4701
13065
13066
13067
13068
13069
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1   -0.2 -1.0 -0.7
ypd buoyancy 40 hrs No Buoyancy Separation -0.1   -0.7 -0.5 0.0
growth on ricinoleic acid YNB Glucose -0.0   -0.9 -0.4 0.1
growth on oleic acid YNB Glucose 0.1   -0.5 -0.8 0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1   -1.1 0.1 0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.0   -0.6 -0.1 0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.2   0.2 -0.6 -0.5
growth on ypd YPD -0.1   0.6 -0.5 -0.4
ypd buoyancy 40 hrs High Buoyancy -0.1   -0.4 0.3 -0.2
auxotrophy YNB Glucose 0.2   -0.0 -0.3 0.0
growth on oleic acid YNB Oleic Acid 0.1   -0.2 -0.2 0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1   -0.3 0.2 0.2
auxotrophy YNB Glucose 75mM Methionine 0.3   0.0 -0.4 0.2
facs on lipid accumulation Sorted Low BODIPY Gate 0.0   0.4 -0.2 -0.1
auxotrophy Dropout Complete 0.1   0.1 -0.2 0.2
ypd buoyancy 40 hrs Median Buoyancy -0.2   -0.1 0.3 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2   0.1 0.3 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3   -0.0 0.2 -0.1
auxotrophy YNB Glucose 75mM Arginine 0.0   0.3 0.0 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2   -0.1 0.2 0.7
facs on lipid accumulation Sorted High BODIPY Gate 0.1   0.5 0.2 0.6
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