Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4646: 13014 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 681473 to 684221 13014 mRNA_4647: 13015 - K03032 PSMD1, RPN2 26S proteasome regulatory subunit N2, at 684637 to 688290 13015 mRNA_4648: 13016 - HMMPfam-Mediator complex subunit Med5-PF08689, at 688387 to 691863 13016 mRNA_4649: 13017 - K03934 NDUFS1 NADH dehydrogenase (ubiquinone) Fe-S protein 1, at 692072 to 694733 13017 mRNA_4650: 13018 - K02919 RP-L36, MRPL36, rpmJ large subunit ribosomal protein L36, at 695007 to 695565 13018
Group Condition mRNA_4646 mRNA_4647 mRNA_4648 mRNA_4649 mRNA_4650
13014
13015
13016
13017
13018
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2   -0.0   -0.3
growth on ricinoleic acid YNB Glucose -0.1   -0.2   -0.2
ypd buoyancy 40 hrs High Buoyancy -0.2   -0.2   -0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.5   -0.1   0.2
ypd buoyancy 40 hrs Low Buoyancy -0.2   -0.1   -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2   -0.1   -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.2   -0.0   -0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.1   -0.0   -0.3
facs on lipid accumulation Sorted Low BODIPY Gate 0.2   0.4   -0.7
growth on ricinoleic acid YNB Ricinoleic Acid -0.0   -0.0   -0.0
growth on ypd YPD -0.0   -0.0   0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.2   0.4   -0.1
growth on oleic acid YNB Oleic Acid 0.1   -0.0   0.3
growth on oleic acid YNB Glucose 0.1   -0.2   0.5
auxotrophy YNB Glucose 0.1   0.1   0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4   0.2   0.6
auxotrophy YNB Glucose 75mM Methionine 0.1   -0.0   0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4   0.2   0.7
auxotrophy YNB Glucose 75mM Arginine -0.1   -0.0   0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.0   0.1   0.5
auxotrophy Dropout Complete 0.3   0.0   0.5
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