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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4646: 13014 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 681473 to 684221
13014
mRNA_4647: 13015 - K03032 PSMD1, RPN2 26S proteasome regulatory subunit N2, at 684637 to 688290
13015
mRNA_4648: 13016 - HMMPfam-Mediator complex subunit Med5-PF08689, at 688387 to 691863
13016
mRNA_4649: 13017 - K03934 NDUFS1 NADH dehydrogenase (ubiquinone) Fe-S protein 1, at 692072 to 694733
13017
mRNA_4650: 13018 - K02919 RP-L36, MRPL36, rpmJ large subunit ribosomal protein L36, at 695007 to 695565
13018
Group
Condition
mRNA_4646
mRNA_4647
mRNA_4648
mRNA_4649
mRNA_4650
13014
13015
13016
13017
13018
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.0
-0.3
growth on ricinoleic acid
YNB Glucose
-0.1
-0.2
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.2
-0.2
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
-0.1
0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.1
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-0.1
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.0
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
-0.0
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
0.2
0.4
-0.7
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
-0.0
-0.0
growth on ypd
YPD
-0.0
-0.0
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
0.4
-0.1
growth on oleic acid
YNB Oleic Acid
0.1
-0.0
0.3
growth on oleic acid
YNB Glucose
0.1
-0.2
0.5
auxotrophy
YNB Glucose
0.1
0.1
0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.4
0.2
0.6
auxotrophy
YNB Glucose 75mM Methionine
0.1
-0.0
0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
0.2
0.7
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.0
0.7
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.0
0.1
0.5
auxotrophy
Dropout Complete
0.3
0.0
0.5
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