Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4637: 13005 - Hypothetical Protein, at 661764 to 663098 13005 mRNA_4638: 13006 - HMMPfam-GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p-PF13839,SUPERFAMILY--SSF52266, at 663192 to 664874 13006 mRNA_4639: 13007 - KOG3469 Cytochrome c oxidase, subunit VIa/COX13, at 665005 to 666466 13007 mRNA_4640: 13008 - KOG1399 Flavin-containing monooxygenase, at 666733 to 668799 13008 mRNA_4641: 13009 - KOG1161 Protein involved in vacuolar polyphosphate accumulation, contains SPX domain, at 669193 to 672697 13009
Group Condition mRNA_4637 mRNA_4638 mRNA_4639 mRNA_4640 mRNA_4641
13005
13006
13007
13008
13009
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 0.3 -0.1 -0.7 -2.3
growth on ricinoleic acid YNB Glucose 0.0 -0.4 -0.2 -0.6 -1.5
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 -0.4 -0.5 -0.2 -1.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.1 -0.3 -0.4 -0.7
auxotrophy YNB Glucose 0.7 -0.1 0.3 -0.4 -1.6
auxotrophy Dropout Complete 0.7 0.1 0.0 -0.3 -1.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.2 0.1 -0.2 -0.5
facs on lipid accumulation Sorted Low BODIPY Gate 0.4 0.1 0.6 -0.6 -1.4
growth on oleic acid YNB Oleic Acid 0.2 0.3 -0.1 -0.2 -1.1
growth on oleic acid YNB Glucose 0.1 0.2 0.4 0.0 -1.5
ypd buoyancy 40 hrs Low Buoyancy -0.1 0.2 -0.0 -0.1 -0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.5 0.0 -0.1 -0.2 -1.0
ypd buoyancy 40 hrs Median Buoyancy -0.2 0.3 0.1 0.1 -0.7
ypd buoyancy 40 hrs High Buoyancy 0.3 0.2 0.0 0.0 -0.9
auxotrophy YNB Glucose 75mM Methionine 0.8 0.0 0.3 -0.1 -1.3
auxotrophy YNB Glucose 75mM Arginine 0.8 0.0 0.1 -0.2 -1.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2 0.1 0.2 -0.1 -0.5
facs on lipid accumulation Sorted No BODIPY Gate 0.3 0.3 0.5 -0.1 -0.5
growth on ypd YPD -0.4 -0.1 0.4 -0.1 0.7
facs on lipid accumulation Sorted High BODIPY Gate 0.4 -0.2 0.4 0.0 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.0 0.3 0.1 -0.2 0.4
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