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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4636: 13004 - BLAST fungal specific transcription protein, putative [Rhiz..., at 660911 to 661323
13004
mRNA_4637: 13005 - Hypothetical Protein, at 661764 to 663098
13005
mRNA_4638: 13006 - HMMPfam-GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p-PF13839,SUPERFAMILY--SSF52266, at 663192 to 664874
13006
mRNA_4639: 13007 - KOG3469 Cytochrome c oxidase, subunit VIa/COX13, at 665005 to 666466
13007
mRNA_4640: 13008 - KOG1399 Flavin-containing monooxygenase, at 666733 to 668799
13008
Group
Condition
mRNA_4636
mRNA_4637
mRNA_4638
mRNA_4639
mRNA_4640
13004
13005
13006
13007
13008
growth on ricinoleic acid
YNB Glucose
-0.4
0.0
-0.4
-0.2
-0.6
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
-0.6
0.3
-0.1
-0.7
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.1
-0.1
-0.3
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.1
0.2
-0.4
-0.5
-0.2
growth on ypd
YPD
-0.5
-0.4
-0.1
0.4
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.0
-0.2
0.1
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
0.4
0.1
0.6
-0.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
0.5
0.0
-0.1
-0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.2
0.3
0.1
0.1
ypd buoyancy
40 hrs Low Buoyancy
0.3
-0.1
0.2
-0.0
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.1
0.0
0.3
0.1
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
0.2
0.1
0.2
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.1
0.3
0.2
0.0
0.0
auxotrophy
YNB Glucose
0.2
0.7
-0.1
0.3
-0.4
auxotrophy
Dropout Complete
0.2
0.7
0.1
0.0
-0.3
growth on oleic acid
YNB Oleic Acid
0.5
0.2
0.3
-0.1
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
0.3
0.4
-0.2
0.4
0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
0.3
0.3
0.5
-0.1
auxotrophy
YNB Glucose 75mM Arginine
0.3
0.8
0.0
0.1
-0.2
auxotrophy
YNB Glucose 75mM Methionine
0.2
0.8
0.0
0.3
-0.1
growth on oleic acid
YNB Glucose
0.5
0.1
0.2
0.4
0.0
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