Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4627: 12995 - K16196 EIF2AK4 eukaryotic translation initiation factor 2-alpha kinase 4, at 632706 to 638769 12995 mRNA_4628: 12996 - KOG0253 Synaptic vesicle transporter SV2 (major facilitator superfamily), at 639260 to 641629 12996 mRNA_4629: 12997 - K11971 RNF14, ARA54 E3 ubiquitin-protein ligase RNF14, at 642577 to 644729 12997 mRNA_4630: 12998 - Hypothetical Protein, at 646007 to 648438 12998 mRNA_4631: 12999 - SUPERFAMILY--SSF103506, at 649223 to 651329 12999
Group Condition mRNA_4627 mRNA_4628 mRNA_4629 mRNA_4630 mRNA_4631
12995
12996
12997
12998
12999
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 -0.8 -2.1 -0.6 -0.5
auxotrophy YNB Glucose 75mM Methionine -0.7 0.1 -1.6 0.1 0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.6 0.1 -0.5 -0.0 -0.7
growth on oleic acid YNB Glucose -0.3 -0.7 0.0 0.0 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -0.1 -0.4 0.0 -0.2
auxotrophy YNB Glucose -0.3 0.1 -0.8 -0.2 0.2
auxotrophy Dropout Complete -0.1 0.5 -1.1 -0.2 0.2
auxotrophy YNB Glucose 75mM Arginine -0.2 0.3 -0.7 -0.1 0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -1.4 -0.2 0.3 0.4 0.3
ypd buoyancy 40 hrs Low Buoyancy -0.1 0.0 -0.7 0.1 0.2
growth on oleic acid YNB Oleic Acid -0.3 -0.2 -0.0 0.1 0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.6 -0.1 0.1 0.4 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate 0.0 0.5 -0.3 -0.1 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -1.5 0.4 0.2 0.4 0.5
ypd buoyancy 40 hrs Median Buoyancy -0.0 0.4 -0.4 -0.0 0.0
growth on ricinoleic acid YNB Ricinoleic Acid -1.3 0.5 0.3 0.3 0.5
growth on ricinoleic acid YNB Glucose -0.4 0.1 0.2 0.2 0.4
growth on ypd YPD 0.2 1.3 -0.7 -0.2 -0.0
ypd buoyancy 40 hrs High Buoyancy -0.0 0.4 -0.2 0.1 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.0 0.0 0.5 0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.7 -0.1 0.1 0.5 0.0
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