Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4604: 12972 - K10747 LIG1 DNA ligase 1, at 565709 to 567987 12972 mRNA_4605: 12973 - KOG0254 Predicted transporter (major facilitator superfamily), at 568226 to 569633 12973 mRNA_4606: 12974 - HMMPfam-Zinc-binding dehydrogenase-PF00107,HMMPfam-Alcohol dehydrogenase GroES-like domain-PF08240,ProSitePatterns-Zinc-containing alcohol dehydrogenases signature.-PS00059,SUPERFAMILY--SSF50129,SUPERFAMILY--SSF51735, at 569895 to 571183 12974 mRNA_4607: 12975 - BLAST TrfA domain protein, putative [Rhizoctonia solani AG-..., at 571268 to 571973 12975 mRNA_4608: 12976 - KOG0254 Predicted transporter (major facilitator superfamily), at 572565 to 575380 12976
Group Condition mRNA_4604 mRNA_4605 mRNA_4606 mRNA_4607 mRNA_4608
12972
12973
12974
12975
12976
facs on lipid accumulation Sorted Low BODIPY Gate   0.1 0.1 -0.4 -0.6
growth on oleic acid YNB Glucose   0.4 0.3 -1.3 -0.0
growth on ypd YPD   0.4 -0.5 -0.3 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid   0.2 -0.0 -0.7 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.1 0.1 -0.6 0.2
facs on lipid accumulation Sorted High BODIPY Gate   -0.4 0.1 0.1 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.7 0.2 -0.7 -0.5
facs on lipid accumulation Sorted No BODIPY Gate   0.1 0.5 -0.4 -0.4
growth on oleic acid YNB Oleic Acid   -0.0 0.1 -0.6 0.3
auxotrophy YNB Glucose 75mM Arginine   0.8 -0.0 -1.1 0.3
auxotrophy YNB Glucose 75mM Methionine   1.0 0.2 -0.9 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.4 0.4 -0.7 0.0
auxotrophy Dropout Complete   0.8 0.2 -0.8 0.1
auxotrophy YNB Glucose   0.9 0.3 -0.7 0.1
ypd buoyancy 40 hrs Median Buoyancy   0.1 0.2 0.1 0.2
ypd buoyancy 40 hrs Low Buoyancy   0.4 -0.2 0.6 -0.1
ypd buoyancy 40 hrs High Buoyancy   -0.2 0.2 0.3 0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.6 0.3 -0.1 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.5 0.3 -0.2 0.2
growth on ricinoleic acid YNB Glucose   0.1 0.2 0.1 0.5
ypd buoyancy 40 hrs No Buoyancy Separation   -0.2 -0.0 0.9 0.9
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