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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4603: 12971 - K07119 K07119 uncharacterized protein, at 563356 to 565108
12971
mRNA_4604: 12972 - K10747 LIG1 DNA ligase 1, at 565709 to 567987
12972
mRNA_4605: 12973 - KOG0254 Predicted transporter (major facilitator superfamily), at 568226 to 569633
12973
mRNA_4606: 12974 - HMMPfam-Zinc-binding dehydrogenase-PF00107,HMMPfam-Alcohol dehydrogenase GroES-like domain-PF08240,ProSitePatterns-Zinc-containing alcohol dehydrogenases signature.-PS00059,SUPERFAMILY--SSF50129,SUPERFAMILY--SSF51735, at 569895 to 571183
12974
mRNA_4607: 12975 - BLAST TrfA domain protein, putative [Rhizoctonia solani AG-..., at 571268 to 571973
12975
Group
Condition
mRNA_4603
mRNA_4604
mRNA_4605
mRNA_4606
mRNA_4607
12971
12972
12973
12974
12975
growth on ricinoleic acid
YNB Ricinoleic Acid
-1.3
0.2
-0.0
-0.7
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.5
-0.1
0.1
-0.6
facs on lipid accumulation
Sorted High BODIPY Gate
-0.5
-0.4
0.1
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.6
0.1
0.5
-0.4
growth on oleic acid
YNB Glucose
0.1
0.4
0.3
-1.3
growth on oleic acid
YNB Oleic Acid
-0.0
-0.0
0.1
-0.6
growth on ypd
YPD
0.0
0.4
-0.5
-0.3
auxotrophy
YNB Glucose 75mM Arginine
0.0
0.8
-0.0
-1.1
facs on lipid accumulation
Sorted Low BODIPY Gate
0.2
0.1
0.1
-0.4
ypd buoyancy
40 hrs No Buoyancy Separation
-0.6
-0.2
-0.0
0.9
ypd buoyancy
40 hrs Median Buoyancy
-0.2
0.1
0.2
0.1
ypd buoyancy
40 hrs High Buoyancy
0.1
-0.2
0.2
0.3
growth on ricinoleic acid
YNB Glucose
-0.1
0.1
0.2
0.1
auxotrophy
Dropout Complete
0.1
0.8
0.2
-0.8
auxotrophy
YNB Glucose 75mM Methionine
0.2
1.0
0.2
-0.9
auxotrophy
YNB Glucose
0.0
0.9
0.3
-0.7
ypd buoyancy
40 hrs Low Buoyancy
-0.1
0.4
-0.2
0.6
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.6
0.4
0.4
-0.7
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.7
0.7
0.2
-0.7
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.5
0.6
0.3
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.8
0.5
0.3
-0.2
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