Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_4603: 12971 - K07119 K07119 uncharacterized protein, at 563356 to 565108 12971 mRNA_4604: 12972 - K10747 LIG1 DNA ligase 1, at 565709 to 567987 12972 mRNA_4605: 12973 - KOG0254 Predicted transporter (major facilitator superfamily), at 568226 to 569633 12973 mRNA_4606: 12974 - HMMPfam-Zinc-binding dehydrogenase-PF00107,HMMPfam-Alcohol dehydrogenase GroES-like domain-PF08240,ProSitePatterns-Zinc-containing alcohol dehydrogenases signature.-PS00059,SUPERFAMILY--SSF50129,SUPERFAMILY--SSF51735, at 569895 to 571183 12974 mRNA_4607: 12975 - BLAST TrfA domain protein, putative [Rhizoctonia solani AG-..., at 571268 to 571973 12975
Group Condition mRNA_4603 mRNA_4604 mRNA_4605 mRNA_4606 mRNA_4607
12971
12972
12973
12974
12975
growth on ricinoleic acid YNB Ricinoleic Acid -1.3   0.2 -0.0 -0.7
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5   -0.1 0.1 -0.6
facs on lipid accumulation Sorted High BODIPY Gate -0.5   -0.4 0.1 0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.6   0.1 0.5 -0.4
growth on oleic acid YNB Glucose 0.1   0.4 0.3 -1.3
growth on oleic acid YNB Oleic Acid -0.0   -0.0 0.1 -0.6
growth on ypd YPD 0.0   0.4 -0.5 -0.3
auxotrophy YNB Glucose 75mM Arginine 0.0   0.8 -0.0 -1.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.2   0.1 0.1 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation -0.6   -0.2 -0.0 0.9
ypd buoyancy 40 hrs Median Buoyancy -0.2   0.1 0.2 0.1
ypd buoyancy 40 hrs High Buoyancy 0.1   -0.2 0.2 0.3
growth on ricinoleic acid YNB Glucose -0.1   0.1 0.2 0.1
auxotrophy Dropout Complete 0.1   0.8 0.2 -0.8
auxotrophy YNB Glucose 75mM Methionine 0.2   1.0 0.2 -0.9
auxotrophy YNB Glucose 0.0   0.9 0.3 -0.7
ypd buoyancy 40 hrs Low Buoyancy -0.1   0.4 -0.2 0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.6   0.4 0.4 -0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.7   0.7 0.2 -0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.5   0.6 0.3 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.8   0.5 0.3 -0.2
remove
mRNA_4603
plot
remove
mRNA_4604
plot
remove
mRNA_4605
remove
mRNA_4606
plot
remove
mRNA_4607
plot