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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4600: 12968 - K08343 ATG3 ubiquitin-like-conjugating enzyme ATG3, at 558585 to 560759
12968
mRNA_4601: 12969 - HMMPfam-Sen15 protein-PF09631,SUPERFAMILY--SSF53032, at 560875 to 561580
12969
mRNA_4602: 12970 - HMMPfam-NYN domain-PF01936, at 561866 to 562949
12970
mRNA_4603: 12971 - K07119 K07119 uncharacterized protein, at 563356 to 565108
12971
mRNA_4604: 12972 - K10747 LIG1 DNA ligase 1, at 565709 to 567987
12972
Group
Condition
mRNA_4600
mRNA_4601
mRNA_4602
mRNA_4603
mRNA_4604
12968
12969
12970
12971
12972
facs on lipid accumulation
Sorted High BODIPY Gate
-4.3
-0.1
-0.5
facs on lipid accumulation
Sorted No BODIPY Gate
-1.8
-0.2
-0.6
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.5
-0.4
-1.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
-0.6
-0.6
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
-0.3
-0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-1.8
0.2
0.8
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.1
-0.2
growth on oleic acid
YNB Glucose
0.1
-0.6
0.1
growth on ricinoleic acid
YNB Glucose
-0.0
-0.2
-0.1
growth on oleic acid
YNB Oleic Acid
-0.1
-0.2
-0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.2
0.2
-0.1
auxotrophy
YNB Glucose
-0.4
0.2
0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.5
0.2
0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.3
0.2
0.0
ypd buoyancy
40 hrs High Buoyancy
-0.0
-0.0
0.1
auxotrophy
Dropout Complete
0.0
0.1
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.6
0.2
0.7
facs on lipid accumulation
Sorted Low BODIPY Gate
0.3
-0.1
0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
0.3
0.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.6
-0.1
0.5
growth on ypd
YPD
0.6
0.6
0.0
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