Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4570: 12938 - HMMPfam-bZIP transcription factor-PF00170,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959, at 491173 to 492372 12938 mRNA_4571: 12939 - KOG4419 5' nucleotidase, at 493411 to 495654 12939 mRNA_4572: 12940 - K06963 TAN1, THUMPD1 tRNA acetyltransferase TAN1, at 495766 to 497109 12940 mRNA_4573: 12941 - K03142 TFIIH2, GTF2H2, SSL1 transcription initiation factor TFIIH subunit 2, at 497233 to 498989 12941 mRNA_4574: 12942 - K12184 VPS28 ESCRT-I complex subunit VPS28, at 499044 to 500144 12942
Group Condition mRNA_4570 mRNA_4571 mRNA_4572 mRNA_4573 mRNA_4574
12938
12939
12940
12941
12942
growth on ricinoleic acid YNB Glucose -1.1 -0.1      
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 -0.6      
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 -0.6      
growth on oleic acid YNB Glucose -0.8 0.0      
facs on lipid accumulation Sorted High BODIPY Gate -0.7 -0.1      
auxotrophy YNB Glucose 75mM Methionine -1.2 0.5      
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 -0.0      
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.7 0.2      
auxotrophy YNB Glucose -0.8 0.5      
growth on oleic acid YNB Oleic Acid -0.2 -0.1      
ypd buoyancy 40 hrs High Buoyancy 0.0 -0.3      
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 0.2      
facs on lipid accumulation Sorted No BODIPY Gate -0.5 0.3      
auxotrophy YNB Glucose 75mM Arginine -0.8 0.7      
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.2      
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 0.1      
ypd buoyancy 40 hrs No Buoyancy Separation 0.7 -0.7      
auxotrophy Dropout Complete -0.7 0.8      
growth on ypd YPD -0.3 0.5      
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.7 -0.4      
ypd buoyancy 40 hrs Median Buoyancy 0.3 0.0      
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