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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4569: 12937 - HMMPfam-Integral peroxisomal membrane peroxin-PF06398, at 489481 to 490955
12937
mRNA_4570: 12938 - HMMPfam-bZIP transcription factor-PF00170,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959, at 491173 to 492372
12938
mRNA_4571: 12939 - KOG4419 5' nucleotidase, at 493411 to 495654
12939
mRNA_4572: 12940 - K06963 TAN1, THUMPD1 tRNA acetyltransferase TAN1, at 495766 to 497109
12940
mRNA_4573: 12941 - K03142 TFIIH2, GTF2H2, SSL1 transcription initiation factor TFIIH subunit 2, at 497233 to 498989
12941
Group
Condition
mRNA_4569
mRNA_4570
mRNA_4571
mRNA_4572
mRNA_4573
12937
12938
12939
12940
12941
growth on oleic acid
YNB Glucose
-1.2
-0.8
0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.7
-0.4
-0.6
ypd buoyancy
40 hrs Low Buoyancy
-0.9
0.1
-0.2
growth on oleic acid
YNB Oleic Acid
-0.7
-0.2
-0.1
growth on ricinoleic acid
YNB Glucose
0.5
-1.1
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.0
-1.2
0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.5
-0.0
ypd buoyancy
40 hrs High Buoyancy
0.0
0.0
-0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.5
0.3
0.0
facs on lipid accumulation
Sorted No BODIPY Gate
0.0
-0.5
0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
0.2
-0.4
0.2
facs on lipid accumulation
Sorted High BODIPY Gate
0.8
-0.7
-0.1
auxotrophy
YNB Glucose
0.6
-0.8
0.5
ypd buoyancy
40 hrs No Buoyancy Separation
0.4
0.7
-0.7
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.3
0.7
-0.4
growth on ypd
YPD
0.4
-0.3
0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
1.1
-0.7
0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
1.7
-0.4
-0.6
auxotrophy
YNB Glucose 75mM Arginine
1.0
-0.8
0.7
buoyancy on lipid accumulation
40 hrs High Buoyancy
1.0
-0.2
0.1
auxotrophy
Dropout Complete
0.9
-0.7
0.8
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