Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4566: 12934 - KOG2273 Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins, at 479407 to 483783 12934 mRNA_4567: 12935 - K10743 RNASEH2A ribonuclease H2 subunit A, at 484052 to 485585 12935 mRNA_4568: 12936 - Hypothetical Protein, at 485805 to 489325 12936 mRNA_4569: 12937 - HMMPfam-Integral peroxisomal membrane peroxin-PF06398, at 489481 to 490955 12937 mRNA_4570: 12938 - HMMPfam-bZIP transcription factor-PF00170,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959, at 491173 to 492372 12938
Group Condition mRNA_4566 mRNA_4567 mRNA_4568 mRNA_4569 mRNA_4570
12934
12935
12936
12937
12938
growth on oleic acid YNB Glucose -0.0 -0.1 -0.1 -1.2 -0.8
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 -0.7 0.1 -0.7 -0.4
auxotrophy YNB Glucose 75mM Methionine 0.2 0.1 -0.2 -0.0 -1.2
growth on ricinoleic acid YNB Glucose -0.1 -0.0 -0.3 0.5 -1.1
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.4 0.1 0.0 -0.5
growth on oleic acid YNB Oleic Acid -0.1 0.1 -0.1 -0.7 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.0 0.1 -0.1 -0.1 -0.5
ypd buoyancy 40 hrs Low Buoyancy 0.1 0.2 -0.1 -0.9 0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.3 -0.1 0.8 -0.7
ypd buoyancy 40 hrs Median Buoyancy 0.1 0.3 -0.2 -0.5 0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 0.4 -0.0 0.2 -0.4
ypd buoyancy 40 hrs High Buoyancy 0.1 0.2 -0.2 0.0 0.0
growth on ypd YPD 0.1 0.1 0.0 0.4 -0.3
auxotrophy Dropout Complete 0.4 0.1 -0.3 0.9 -0.7
auxotrophy YNB Glucose 0.3 0.4 -0.2 0.6 -0.8
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 0.1 0.2 1.1 -0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.3 -0.1 1.7 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 -0.0 -0.1 0.3 0.7
auxotrophy YNB Glucose 75mM Arginine 0.2 0.4 -0.1 1.0 -0.8
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 0.7 -0.3 0.4 0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 0.3 0.1 1.0 -0.2
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