Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4564: 12932 - K11844 USP16_45 ubiquitin carboxyl-terminal hydrolase 16/45, at 473313 to 477203 12932 mRNA_4565: 12933 - KOG2793 Putative N2,N2-dimethylguanosine tRNA methyltransferase, at 477682 to 479259 12933 mRNA_4566: 12934 - KOG2273 Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins, at 479407 to 483783 12934 mRNA_4567: 12935 - K10743 RNASEH2A ribonuclease H2 subunit A, at 484052 to 485585 12935 mRNA_4568: 12936 - Hypothetical Protein, at 485805 to 489325 12936
Group Condition mRNA_4564 mRNA_4565 mRNA_4566 mRNA_4567 mRNA_4568
12932
12933
12934
12935
12936
buoyancy on lipid accumulation 40 hrs Low Buoyancy -1.0 -0.5 -0.0 -0.0 -0.1
growth on ricinoleic acid YNB Glucose -0.3 -0.7 -0.1 -0.0 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.5 -0.5 0.7 -0.3
facs on lipid accumulation Sorted High BODIPY Gate 0.0 -0.3 -0.1 -0.3 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 -1.0 -0.1 0.4 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 -0.0 -0.2 -0.3 -0.1
auxotrophy Dropout Complete -0.2 0.1 0.4 0.1 -0.3
growth on oleic acid YNB Glucose 0.3 -0.1 -0.0 -0.1 -0.1
auxotrophy YNB Glucose 75mM Methionine 0.1 -0.1 0.2 0.1 -0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.7 -0.1 -0.1 -0.4 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.3 -0.2 0.0 0.1 -0.1
auxotrophy YNB Glucose -0.3 -0.1 0.3 0.4 -0.2
growth on ypd YPD 0.2 -0.0 0.1 0.1 0.0
ypd buoyancy 40 hrs Low Buoyancy -0.3 0.4 0.1 0.2 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.0 0.2 0.4 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.6 -0.2 -0.2 0.1 0.2
facs on lipid accumulation Sorted Low BODIPY Gate 1.4 0.3 -0.5 -0.7 0.1
ypd buoyancy 40 hrs High Buoyancy 0.4 0.3 0.1 0.2 -0.2
ypd buoyancy 40 hrs Median Buoyancy 0.4 0.4 0.1 0.3 -0.2
growth on oleic acid YNB Oleic Acid 1.1 0.1 -0.1 0.1 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 1.0 -0.1 -0.1 0.3 0.1
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