Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_4562: 12930 - K11366 USP22_27_51, UBP8 ubiquitin carboxyl-terminal hydrolase 22/27/51, at 466499 to 468748 12930 mRNA_4563: 12931 - KOG1601 GATA-4/5/6 transcription factors, at 469300 to 472637 12931 mRNA_4564: 12932 - K11844 USP16_45 ubiquitin carboxyl-terminal hydrolase 16/45, at 473313 to 477203 12932 mRNA_4565: 12933 - KOG2793 Putative N2,N2-dimethylguanosine tRNA methyltransferase, at 477682 to 479259 12933 mRNA_4566: 12934 - KOG2273 Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins, at 479407 to 483783 12934
Group Condition mRNA_4562 mRNA_4563 mRNA_4564 mRNA_4565 mRNA_4566
12930
12931
12932
12933
12934
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 -0.6 -1.0 -0.5 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 -0.0 0.1 -1.0 -0.1
auxotrophy Dropout Complete -0.6 -0.7 -0.2 0.1 0.4
growth on ricinoleic acid YNB Glucose -0.3 0.4 -0.3 -0.7 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.6 0.1 -0.0 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.4 -0.6 0.1 -0.1 0.2
auxotrophy YNB Glucose 75mM Arginine -0.4 -0.4 -0.1 -0.0 0.2
auxotrophy YNB Glucose -0.5 -0.2 -0.3 -0.1 0.3
ypd buoyancy 40 hrs No Buoyancy Separation 0.8 -0.0 -0.3 -0.5 -0.5
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.5 0.7 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.2 0.6 -0.2 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.1 -0.3 0.4 0.1
growth on oleic acid YNB Glucose -0.3 0.2 0.3 -0.1 -0.0
growth on ypd YPD -0.1 0.0 0.2 -0.0 0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.4 1.0 0.0 -0.3 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 0.4 0.3 -0.2 0.0
growth on oleic acid YNB Oleic Acid -0.2 -0.3 1.1 0.1 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.1 1.0 -0.1 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.2 -0.5 1.4 0.3 -0.5
ypd buoyancy 40 hrs High Buoyancy 0.2 0.2 0.4 0.3 0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.8 0.4 0.4 0.1
remove
mRNA_4562
plot		 remove
mRNA_4563
plot		 remove
mRNA_4564		 remove
mRNA_4565
plot		 remove
mRNA_4566
plot