Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4561: 12929 - K06990 MEMO1 MEMO1 family protein, at 464488 to 466003 12929 mRNA_4562: 12930 - K11366 USP22_27_51, UBP8 ubiquitin carboxyl-terminal hydrolase 22/27/51, at 466499 to 468748 12930 mRNA_4563: 12931 - KOG1601 GATA-4/5/6 transcription factors, at 469300 to 472637 12931 mRNA_4564: 12932 - K11844 USP16_45 ubiquitin carboxyl-terminal hydrolase 16/45, at 473313 to 477203 12932 mRNA_4565: 12933 - KOG2793 Putative N2,N2-dimethylguanosine tRNA methyltransferase, at 477682 to 479259 12933
Group Condition mRNA_4561 mRNA_4562 mRNA_4563 mRNA_4564 mRNA_4565
12929
12930
12931
12932
12933
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.3 0.1 -0.6 -1.0 -0.5
facs on lipid accumulation Sorted No BODIPY Gate -1.2 -0.1 -0.5 0.7 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -1.5 -0.4 1.0 0.0 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.4 -0.4 -0.1 -0.0
auxotrophy Dropout Complete 0.3 -0.6 -0.7 -0.2 0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 -0.4 -0.0 0.1 -1.0
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.4 -0.6 0.1 -0.1
growth on ricinoleic acid YNB Glucose -0.1 -0.3 0.4 -0.3 -0.7
auxotrophy YNB Glucose 0.1 -0.5 -0.2 -0.3 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 -0.2 -0.6 0.1 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 0.8 -0.0 -0.3 -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -1.0 -0.2 -0.1 1.0 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 -0.1 -0.2 0.6 -0.2
ypd buoyancy 40 hrs Low Buoyancy 0.0 -0.0 -0.1 -0.3 0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.1 0.4 0.3 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -1.0 0.2 -0.5 1.4 0.3
growth on oleic acid YNB Glucose 0.4 -0.3 0.2 0.3 -0.1
growth on oleic acid YNB Oleic Acid 0.2 -0.2 -0.3 1.1 0.1
growth on ypd YPD 0.7 -0.1 0.0 0.2 -0.0
ypd buoyancy 40 hrs High Buoyancy 0.5 0.2 0.2 0.4 0.3
ypd buoyancy 40 hrs Median Buoyancy 0.3 -0.1 0.8 0.4 0.4
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