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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4557: 12925 - KOG3318 Predicted membrane protein, at 456635 to 457680
12925
mRNA_4558: 12926 - K03320 amt, AMT, MEP ammonium transporter, Amt family, at 457914 to 459915
12926
mRNA_4559: 12927 - HMMPfam-PAP2 superfamily-PF01569,SMART-Acid phosphatase homologues-SM00014,SUPERFAMILY--SSF48317, at 460890 to 462526
12927
mRNA_4560: 12928 - Hypothetical Protein, at 463085 to 464279
12928
mRNA_4561: 12929 - K06990 MEMO1 MEMO1 family protein, at 464488 to 466003
12929
Group
Condition
mRNA_4557
mRNA_4558
mRNA_4559
mRNA_4560
mRNA_4561
12925
12926
12927
12928
12929
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
-0.5
-1.3
-1.5
facs on lipid accumulation
Sorted Low BODIPY Gate
0.3
-1.1
-0.3
-1.0
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
-0.6
-0.5
-1.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.7
-0.5
0.4
-1.0
auxotrophy
YNB Glucose 75mM Arginine
0.1
-0.4
-0.5
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.2
-0.5
-0.4
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
-0.1
-0.1
-0.4
auxotrophy
YNB Glucose 75mM Methionine
0.3
-0.3
-0.5
-0.0
growth on oleic acid
YNB Oleic Acid
-0.1
-0.4
0.1
0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
0.2
-0.6
0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.5
-0.1
0.4
0.1
growth on oleic acid
YNB Glucose
-0.1
-0.2
-0.1
0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
-0.3
0.3
0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.0
-0.5
0.4
0.0
auxotrophy
Dropout Complete
0.0
0.0
-0.2
0.3
growth on ricinoleic acid
YNB Glucose
0.2
-0.1
0.0
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
-0.1
0.9
-0.4
ypd buoyancy
40 hrs Median Buoyancy
-0.0
-0.1
0.1
0.3
auxotrophy
YNB Glucose
0.2
-0.1
0.1
0.1
ypd buoyancy
40 hrs High Buoyancy
0.3
-0.4
0.1
0.5
growth on ypd
YPD
-0.1
0.2
-0.0
0.7
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