Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4548: 12916 - K03392 ACMSD aminocarboxymuconate-semialdehyde decarboxylase, at 433580 to 435269 12916 mRNA_4549: 12917 - HMMPfam-Protein of unknown function (DUF1769)-PF08588, at 435952 to 437989 12917 mRNA_4550: 12918 - K16186 RRAGC_D Ras-related GTP-binding protein C/D, at 438083 to 440152 12918 mRNA_4551: 12919 - HMMPfam-Whi5 like-PF08528, at 440384 to 442291 12919 mRNA_4552: 12920 - KOG2263 Methionine synthase II (cobalamin-independent), at 442717 to 444581 12920
Group Condition mRNA_4548 mRNA_4549 mRNA_4550 mRNA_4551 mRNA_4552
12916
12917
12918
12919
12920
facs on lipid accumulation Sorted High BODIPY Gate -0.9 -0.0 -0.7 0.0 0.2
ypd buoyancy 40 hrs Low Buoyancy -0.8 -0.4 -0.1 0.1 -0.0
growth on ricinoleic acid YNB Glucose -0.5 0.0 -0.2 0.3 -0.5
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 -0.7 0.3 0.2 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2 -0.1 -0.4 0.2 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2 0.2 -0.3 0.0 -0.5
ypd buoyancy 40 hrs High Buoyancy -0.4 -0.3 0.4 -0.1 -0.0
growth on ypd YPD -0.2 -0.2 -0.3 0.3 0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.0 0.2 0.2 -0.2 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 0.2 -0.3 0.0 0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 -0.0 -0.1 -0.0 -0.1
growth on oleic acid YNB Glucose -0.0 0.2 -0.4 0.1 0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.1 0.1 0.1 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid 0.0 -0.1 0.0 0.5 -0.0
auxotrophy YNB Glucose 75mM Methionine 0.3 0.1 -0.5 0.5 -0.1
growth on oleic acid YNB Oleic Acid 0.2 0.2 -0.4 0.2 0.2
auxotrophy YNB Glucose 75mM Arginine 0.3 0.1 -0.3 0.5 -0.2
auxotrophy YNB Glucose 0.5 0.3 -0.2 0.6 -0.6
auxotrophy Dropout Complete 0.4 0.0 -0.1 0.5 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 0.1 0.1 0.5 0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.0 -0.2 0.7 0.4 -0.1
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