Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4545: 12913 - K11088 SNRPD3, SMD3 small nuclear ribonucleoprotein D3, at 427882 to 428716 12913 mRNA_4546: 12914 - K16576 ACTR10, ARP11 actin-related protein 10, at 429003 to 431242 12914 mRNA_4547: 12915 - ProSiteProfiles-SET domain profile.-PS50280,SUPERFAMILY--SSF82199, at 432456 to 433199 12915 mRNA_4548: 12916 - K03392 ACMSD aminocarboxymuconate-semialdehyde decarboxylase, at 433580 to 435269 12916 mRNA_4549: 12917 - HMMPfam-Protein of unknown function (DUF1769)-PF08588, at 435952 to 437989 12917
Group Condition mRNA_4545 mRNA_4546 mRNA_4547 mRNA_4548 mRNA_4549
12913
12914
12915
12916
12917
facs on lipid accumulation Sorted High BODIPY Gate     -1.5 -0.9 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate     -2.1 0.0 -0.2
ypd buoyancy 40 hrs Low Buoyancy     -0.1 -0.8 -0.4
facs on lipid accumulation Sorted No BODIPY Gate     -1.4 -0.0 0.2
ypd buoyancy 40 hrs No Buoyancy Separation     0.1 -0.6 -0.7
ypd buoyancy 40 hrs High Buoyancy     0.3 -0.4 -0.3
ypd buoyancy 40 hrs Median Buoyancy     -0.3 -0.1 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid     0.0 0.0 -0.1
growth on oleic acid YNB Oleic Acid     -0.4 0.2 0.2
growth on ricinoleic acid YNB Glucose     0.6 -0.5 0.0
growth on ypd YPD     0.7 -0.2 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy     0.2 -0.1 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy     0.2 0.2 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation     -0.0 0.2 0.2
auxotrophy Dropout Complete     0.0 0.4 0.0
auxotrophy YNB Glucose 75mM Arginine     0.1 0.3 0.1
growth on oleic acid YNB Glucose     0.6 -0.0 0.2
auxotrophy YNB Glucose 75mM Methionine     0.4 0.3 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy     0.7 0.2 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid     1.1 -0.1 0.1
auxotrophy YNB Glucose     1.0 0.5 0.3
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