Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
500 nt
mRNA_4545: 12913 - K11088 SNRPD3, SMD3 small nuclear ribonucleoprotein D3, at 427882 to 428716
12913
mRNA_4546: 12914 - K16576 ACTR10, ARP11 actin-related protein 10, at 429003 to 431242
12914
mRNA_4547: 12915 - ProSiteProfiles-SET domain profile.-PS50280,SUPERFAMILY--SSF82199, at 432456 to 433199
12915
mRNA_4548: 12916 - K03392 ACMSD aminocarboxymuconate-semialdehyde decarboxylase, at 433580 to 435269
12916
mRNA_4549: 12917 - HMMPfam-Protein of unknown function (DUF1769)-PF08588, at 435952 to 437989
12917
Group
Condition
mRNA_4545
mRNA_4546
mRNA_4547
mRNA_4548
mRNA_4549
12913
12914
12915
12916
12917
facs on lipid accumulation
Sorted High BODIPY Gate
-1.5
-0.9
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-2.1
0.0
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.8
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-1.4
-0.0
0.2
ypd buoyancy
40 hrs No Buoyancy Separation
0.1
-0.6
-0.7
ypd buoyancy
40 hrs High Buoyancy
0.3
-0.4
-0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.3
-0.1
0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.0
0.0
-0.1
growth on oleic acid
YNB Oleic Acid
-0.4
0.2
0.2
growth on ricinoleic acid
YNB Glucose
0.6
-0.5
0.0
growth on ypd
YPD
0.7
-0.2
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.2
-0.1
0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.2
0.2
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
0.2
0.2
auxotrophy
Dropout Complete
0.0
0.4
0.0
auxotrophy
YNB Glucose 75mM Arginine
0.1
0.3
0.1
growth on oleic acid
YNB Glucose
0.6
-0.0
0.2
auxotrophy
YNB Glucose 75mM Methionine
0.4
0.3
0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.7
0.2
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
1.1
-0.1
0.1
auxotrophy
YNB Glucose
1.0
0.5
0.3
remove
mRNA_4545
plot
remove
mRNA_4546
plot
remove
mRNA_4547
remove
mRNA_4548
plot
remove
mRNA_4549
plot