Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4534: 12902 - K03457 TC.NCS1 nucleobase-cation symporter-1, NCS1 family, at 400318 to 402345 12902 mRNA_4535: 12903 - Hypothetical Protein, at 402768 to 403548 12903 mRNA_4536: 12904 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 404129 to 405942 12904 mRNA_4537: 12905 - KOG0472 Leucine-rich repeat protein, at 406318 to 409422 12905 mRNA_4538: 12906 - KOG2112 Lysophospholipase, at 409562 to 410663 12906
Group Condition mRNA_4534 mRNA_4535 mRNA_4536 mRNA_4537 mRNA_4538
12902
12903
12904
12905
12906
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 -0.1 0.0 0.1 -1.8
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 -0.6 0.5 0.4 -1.5
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.9 0.3 -0.2 0.1
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.4 0.3 -0.2 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.5 -0.0 -0.2 -0.7 0.6
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.1 0.1 0.1 0.1
auxotrophy YNB Glucose 75mM Arginine 0.1 -0.1 0.2 -0.1 0.1
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.0 0.5 -0.1 -0.1
growth on oleic acid YNB Oleic Acid 0.0 -0.4 0.0 0.0 0.5
auxotrophy Dropout Complete 0.1 0.2 0.1 -0.2 0.2
growth on oleic acid YNB Glucose 0.3 -0.5 0.1 0.0 0.4
growth on ricinoleic acid YNB Ricinoleic Acid 0.3 0.1 0.5 0.0 -0.6
auxotrophy YNB Glucose 75mM Methionine 0.1 -0.0 0.1 0.2 0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.0 0.1 0.2 0.2 -0.0
growth on ricinoleic acid YNB Glucose 0.1 0.2 -0.0 0.4 0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2 0.0 -0.4 -0.0 0.8
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 -0.0 0.1 -0.3 0.8
growth on ricinoleic acid YNB Methylricinoleic Acid 0.3 0.7 -0.5 0.4 0.1
auxotrophy YNB Glucose 0.4 -0.1 -0.0 0.2 0.7
growth on ypd YPD -0.1 0.6 -0.4 0.3 0.7
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.5 0.1 0.2 0.3 1.3
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