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Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4534: 12902 - K03457 TC.NCS1 nucleobase-cation symporter-1, NCS1 family, at 400318 to 402345
12902
mRNA_4535: 12903 - Hypothetical Protein, at 402768 to 403548
12903
mRNA_4536: 12904 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 404129 to 405942
12904
mRNA_4537: 12905 - KOG0472 Leucine-rich repeat protein, at 406318 to 409422
12905
mRNA_4538: 12906 - KOG2112 Lysophospholipase, at 409562 to 410663
12906
Group
Condition
mRNA_4534
mRNA_4535
mRNA_4536
mRNA_4537
mRNA_4538
12902
12903
12904
12905
12906
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
-0.1
0.0
0.1
-1.8
facs on lipid accumulation
Sorted Low BODIPY Gate
0.1
-0.6
0.5
0.4
-1.5
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.9
0.3
-0.2
0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.4
0.3
-0.2
0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.5
-0.0
-0.2
-0.7
0.6
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.1
0.1
0.1
0.1
auxotrophy
YNB Glucose 75mM Arginine
0.1
-0.1
0.2
-0.1
0.1
ypd buoyancy
40 hrs High Buoyancy
-0.0
-0.0
0.5
-0.1
-0.1
growth on oleic acid
YNB Oleic Acid
0.0
-0.4
0.0
0.0
0.5
auxotrophy
Dropout Complete
0.1
0.2
0.1
-0.2
0.2
growth on oleic acid
YNB Glucose
0.3
-0.5
0.1
0.0
0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
0.3
0.1
0.5
0.0
-0.6
auxotrophy
YNB Glucose 75mM Methionine
0.1
-0.0
0.1
0.2
0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
0.1
0.2
0.2
-0.0
growth on ricinoleic acid
YNB Glucose
0.1
0.2
-0.0
0.4
0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.2
0.0
-0.4
-0.0
0.8
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.1
-0.0
0.1
-0.3
0.8
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.3
0.7
-0.5
0.4
0.1
auxotrophy
YNB Glucose
0.4
-0.1
-0.0
0.2
0.7
growth on ypd
YPD
-0.1
0.6
-0.4
0.3
0.7
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.5
0.1
0.2
0.3
1.3
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