Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4526: 12894 - K12446 E2.7.1.46 L-arabinokinase, at 382744 to 384550 12894 mRNA_4527: 12895 - SUPERFAMILY--SSF50129,SUPERFAMILY--SSF51735, at 384813 to 386229 12895 mRNA_4528: 12896 - Hypothetical Protein, at 386739 to 388320 12896 mRNA_4529: 12897 - HMMPfam-Galactose oxidase, central domain-PF13418,SUPERFAMILY--SSF117281, at 389122 to 390984 12897 mRNA_4530: 12898 - K00605 gcvT, AMT aminomethyltransferase, at 393210 to 395082 12898
Group Condition mRNA_4526 mRNA_4527 mRNA_4528 mRNA_4529 mRNA_4530
12894
12895
12896
12897
12898
growth on ricinoleic acid YNB Methylricinoleic Acid 1.1 -0.3 -0.2 -0.3 -3.0
auxotrophy YNB Glucose 75mM Methionine 0.0 -0.8 -0.2 -0.3 -0.3
auxotrophy Dropout Complete 0.4 -0.4 -0.5 -0.2 -0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.0 -0.4 0.2 -0.1 -0.8
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.3 -0.4 -0.0 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 -0.1 -0.5 0.1 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.6 -0.4 -0.1 0.4 -0.1
auxotrophy YNB Glucose 75mM Arginine 0.2 -0.6 0.1 -0.4 -0.2
growth on oleic acid YNB Glucose 0.3 -0.1 -0.2 -0.1 -0.7
growth on ricinoleic acid YNB Glucose 0.1 -0.6 -0.0 -0.1 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid 1.2 -0.4 0.1 -0.1 -1.4
ypd buoyancy 40 hrs High Buoyancy -0.3 0.3 0.0 -0.1 -0.5
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.3 -0.1 -0.1 0.3
facs on lipid accumulation Sorted High BODIPY Gate 0.8 0.3 -0.3 -0.4 -0.8
growth on oleic acid YNB Oleic Acid 0.6 -0.1 -0.0 -0.3 -0.5
facs on lipid accumulation Sorted No BODIPY Gate 0.8 -0.6 0.3 -0.3 -0.5
auxotrophy YNB Glucose 0.2 -0.7 0.4 0.2 0.2
ypd buoyancy 40 hrs Low Buoyancy -0.0 0.3 0.2 -0.1 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.8 1.8 -0.0 0.1 -0.5
facs on lipid accumulation Sorted Low BODIPY Gate 0.6 0.5 -0.3 -0.5 0.4
growth on ypd YPD -0.0 0.2 1.3 0.6 0.2
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