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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4521: 12889 - SUPERFAMILY--SSF117018, at 374666 to 375210
12889
mRNA_4522: 12890 - KOG0967 ATP-dependent DNA ligase I, at 375338 to 377134
12890
mRNA_4523: 12891 - HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713, at 377162 to 379234
12891
mRNA_4524: 12892 - Hypothetical Protein, at 379640 to 380547
12892
mRNA_4525: 12893 - KOG0143 Iron/ascorbate family oxidoreductases, at 381008 to 382487
12893
Group
Condition
mRNA_4521
mRNA_4522
mRNA_4523
mRNA_4524
mRNA_4525
12889
12890
12891
12892
12893
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
-0.8
0.3
-0.5
0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-2.1
-0.1
0.6
0.8
-0.4
auxotrophy
Dropout Complete
-0.2
0.0
0.1
-0.2
-0.6
ypd buoyancy
40 hrs Low Buoyancy
-0.2
0.2
0.3
0.1
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
-0.3
0.1
0.4
-0.2
auxotrophy
YNB Glucose 75mM Arginine
0.1
0.6
0.0
0.2
-0.6
auxotrophy
YNB Glucose
-0.3
0.6
0.0
0.2
-0.4
auxotrophy
YNB Glucose 75mM Methionine
-0.1
0.4
0.1
0.2
-0.1
growth on ypd
YPD
0.3
0.3
0.5
-0.3
-0.4
growth on ricinoleic acid
YNB Glucose
0.2
-0.0
0.6
0.1
-0.1
ypd buoyancy
40 hrs High Buoyancy
0.2
0.5
0.5
0.1
-0.5
growth on oleic acid
YNB Glucose
0.2
0.2
0.1
0.4
-0.1
ypd buoyancy
40 hrs Median Buoyancy
0.5
-0.0
0.5
0.3
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.7
0.8
0.5
0.1
0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
0.5
0.5
0.2
0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.0
0.4
0.7
0.0
0.2
growth on oleic acid
YNB Oleic Acid
0.3
0.4
0.1
0.4
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.2
0.4
0.1
0.5
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.7
0.1
-0.0
0.4
0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.0
0.5
0.8
0.3
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
0.1
0.3
0.4
1.0
0.3
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