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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4519: 12887 - Hypothetical Protein, at 371547 to 373000
12887
mRNA_4520: 12888 - Hypothetical Protein, at 373888 to 374415
12888
mRNA_4521: 12889 - SUPERFAMILY--SSF117018, at 374666 to 375210
12889
mRNA_4522: 12890 - KOG0967 ATP-dependent DNA ligase I, at 375338 to 377134
12890
mRNA_4523: 12891 - HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713, at 377162 to 379234
12891
Group
Condition
mRNA_4519
mRNA_4520
mRNA_4521
mRNA_4522
mRNA_4523
12887
12888
12889
12890
12891
ypd buoyancy
40 hrs No Buoyancy Separation
0.0
-1.2
-2.1
-0.1
0.6
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-2.3
0.7
0.1
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.5
-0.3
-0.8
0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
-1.2
0.1
0.3
0.4
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
-0.3
0.1
-0.3
0.1
growth on oleic acid
YNB Oleic Acid
0.1
-1.2
0.3
0.4
0.1
ypd buoyancy
40 hrs Low Buoyancy
0.1
-0.5
-0.2
0.2
0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-0.5
-0.7
0.8
0.5
growth on oleic acid
YNB Glucose
-0.0
-0.5
0.2
0.2
0.1
auxotrophy
YNB Glucose
-0.2
-0.2
-0.3
0.6
0.0
growth on ypd
YPD
-0.3
-0.7
0.3
0.3
0.5
auxotrophy
YNB Glucose 75mM Arginine
0.0
-0.5
0.1
0.6
0.0
growth on ricinoleic acid
YNB Glucose
-0.2
0.2
0.2
-0.0
0.6
auxotrophy
Dropout Complete
0.1
0.7
-0.2
0.0
0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
0.2
-0.3
0.5
0.5
auxotrophy
YNB Glucose 75mM Methionine
-0.0
0.6
-0.1
0.4
0.1
ypd buoyancy
40 hrs Median Buoyancy
0.3
0.2
0.5
-0.0
0.5
ypd buoyancy
40 hrs High Buoyancy
0.2
0.2
0.2
0.5
0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
0.4
0.0
0.5
0.8
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.3
0.5
0.0
0.4
0.7
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.2
1.2
0.2
0.4
0.1
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