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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4512: 12880 - KOG1152 Signal transduction serine/threonine kinase with PAS/PAC sensor domain, at 353194 to 354896
12880
mRNA_4513: 12881 - K00981 E2.7.7.41, CDS1, CDS2, cdsA phosphatidate cytidylyltransferase, at 355314 to 357879
12881
mRNA_4514: 12882 - K03241 EIF2B3 translation initiation factor eIF-2B subunit gamma, at 358087 to 360216
12882
mRNA_4515: 12883 - SUPERFAMILY--SSF51735, at 360649 to 361233
12883
mRNA_4516: 12884 - BLAST ketoreductase [Coccidioides immitis RS], at 361313 to 361864
12884
Group
Condition
mRNA_4512
mRNA_4513
mRNA_4514
mRNA_4515
mRNA_4516
12880
12881
12882
12883
12884
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.6
-2.1
-0.9
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.2
-1.0
-1.8
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.1
-1.4
-0.5
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
-0.5
-0.9
-0.0
auxotrophy
YNB Glucose 75mM Arginine
0.2
-0.4
-1.4
-0.0
auxotrophy
Dropout Complete
0.3
-0.6
-0.9
-0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.2
0.3
-0.7
-0.1
growth on oleic acid
YNB Glucose
-0.2
0.0
-0.3
0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.6
-0.6
-0.2
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.6
-0.9
0.9
0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.4
0.2
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.0
-0.3
0.3
-0.0
ypd buoyancy
40 hrs High Buoyancy
0.1
-0.3
0.2
0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.1
0.2
-0.1
0.1
growth on ypd
YPD
-0.2
0.2
0.5
-0.2
growth on ricinoleic acid
YNB Glucose
0.7
0.3
-0.8
0.1
auxotrophy
YNB Glucose
0.2
0.6
-0.2
-0.1
growth on oleic acid
YNB Oleic Acid
-0.1
1.0
-0.2
-0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.2
0.5
0.7
0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
0.7
1.4
-0.8
0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.6
1.4
-0.1
0.2
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