Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4508: 12876 - KOG2263 Methionine synthase II (cobalamin-independent), at 343058 to 345136 12876 mRNA_4509: 12877 - HMMPfam-Ctr copper transporter family-PF04145, at 345259 to 347501 12877 mRNA_4510: 12878 - KOG0627 Heat shock transcription factor, at 348191 to 349956 12878 mRNA_4511: 12879 - Hypothetical Protein, at 351400 to 352761 12879 mRNA_4512: 12880 - KOG1152 Signal transduction serine/threonine kinase with PAS/PAC sensor domain, at 353194 to 354896 12880
Group Condition mRNA_4508 mRNA_4509 mRNA_4510 mRNA_4511 mRNA_4512
12876
12877
12878
12879
12880
facs on lipid accumulation Sorted Low BODIPY Gate 0.2 -0.8 -0.2 0.0 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 0.2 0.1 -0.1 -0.6
growth on ypd YPD -0.1 -0.6 -0.0 0.1 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.4 -0.1 -0.8 0.0 0.6
facs on lipid accumulation Sorted No BODIPY Gate 0.1 0.0 -0.4 0.0 -0.1
ypd buoyancy 40 hrs Median Buoyancy 0.2 -0.4 0.1 0.1 -0.2
ypd buoyancy 40 hrs Low Buoyancy 0.3 -0.4 -0.1 0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy 0.1 -0.5 0.2 0.0 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 0.1 -0.2 -0.0 0.0
growth on oleic acid YNB Oleic Acid 0.2 0.4 -0.3 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 0.3 0.5 -0.1 -0.6
growth on oleic acid YNB Glucose 0.2 0.4 0.1 -0.2 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.5 0.2 -0.3 -0.1 0.2
auxotrophy YNB Glucose 75mM Methionine 0.2 0.9 -0.3 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 0.6 -0.0 -0.1 0.1
auxotrophy Dropout Complete 0.4 0.7 -0.3 -0.1 0.3
growth on ricinoleic acid YNB Glucose 0.2 0.2 0.0 0.0 0.7
auxotrophy YNB Glucose 75mM Arginine 0.5 1.2 -0.5 -0.1 0.2
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 0.8 -0.4 0.0 0.7
auxotrophy YNB Glucose 0.5 0.8 -0.1 -0.1 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.3 0.9 -0.0 -0.1 0.6
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