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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4508: 12876 - KOG2263 Methionine synthase II (cobalamin-independent), at 343058 to 345136
12876
mRNA_4509: 12877 - HMMPfam-Ctr copper transporter family-PF04145, at 345259 to 347501
12877
mRNA_4510: 12878 - KOG0627 Heat shock transcription factor, at 348191 to 349956
12878
mRNA_4511: 12879 - Hypothetical Protein, at 351400 to 352761
12879
mRNA_4512: 12880 - KOG1152 Signal transduction serine/threonine kinase with PAS/PAC sensor domain, at 353194 to 354896
12880
Group
Condition
mRNA_4508
mRNA_4509
mRNA_4510
mRNA_4511
mRNA_4512
12876
12877
12878
12879
12880
facs on lipid accumulation
Sorted Low BODIPY Gate
0.2
-0.8
-0.2
0.0
-0.4
ypd buoyancy
40 hrs No Buoyancy Separation
-0.7
0.2
0.1
-0.1
-0.6
growth on ypd
YPD
-0.1
-0.6
-0.0
0.1
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
-0.1
-0.8
0.0
0.6
facs on lipid accumulation
Sorted No BODIPY Gate
0.1
0.0
-0.4
0.0
-0.1
ypd buoyancy
40 hrs Median Buoyancy
0.2
-0.4
0.1
0.1
-0.2
ypd buoyancy
40 hrs Low Buoyancy
0.3
-0.4
-0.1
0.1
-0.1
ypd buoyancy
40 hrs High Buoyancy
0.1
-0.5
0.2
0.0
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
0.1
-0.2
-0.0
0.0
growth on oleic acid
YNB Oleic Acid
0.2
0.4
-0.3
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
0.3
0.5
-0.1
-0.6
growth on oleic acid
YNB Glucose
0.2
0.4
0.1
-0.2
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.5
0.2
-0.3
-0.1
0.2
auxotrophy
YNB Glucose 75mM Methionine
0.2
0.9
-0.3
-0.1
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.1
0.6
-0.0
-0.1
0.1
auxotrophy
Dropout Complete
0.4
0.7
-0.3
-0.1
0.3
growth on ricinoleic acid
YNB Glucose
0.2
0.2
0.0
0.0
0.7
auxotrophy
YNB Glucose 75mM Arginine
0.5
1.2
-0.5
-0.1
0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
0.1
0.8
-0.4
0.0
0.7
auxotrophy
YNB Glucose
0.5
0.8
-0.1
-0.1
0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.3
0.9
-0.0
-0.1
0.6
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