Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4506: 12874 - KOG4754 Predicted phosphoglycerate mutase, at 339394 to 340797 12874 mRNA_4507: 12875 - K13953 adhP alcohol dehydrogenase, propanol-preferring, at 341056 to 342749 12875 mRNA_4508: 12876 - KOG2263 Methionine synthase II (cobalamin-independent), at 343058 to 345136 12876 mRNA_4509: 12877 - HMMPfam-Ctr copper transporter family-PF04145, at 345259 to 347501 12877 mRNA_4510: 12878 - KOG0627 Heat shock transcription factor, at 348191 to 349956 12878
Group Condition mRNA_4506 mRNA_4507 mRNA_4508 mRNA_4509 mRNA_4510
12874
12875
12876
12877
12878
ypd buoyancy 40 hrs No Buoyancy Separation -0.8 -0.4 -0.7 0.2 0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.1 -0.4 -0.1 -0.8
growth on ricinoleic acid YNB Ricinoleic Acid -1.0 -0.4 0.1 0.8 -0.4
growth on ypd YPD -0.4 0.2 -0.1 -0.6 -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.5 0.0 0.3 -0.4 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.4 -0.1 0.1 -0.5 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5 -0.8 0.1 0.3 0.5
growth on oleic acid YNB Oleic Acid -0.7 0.0 0.2 0.4 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.2 0.1 0.1 -0.2
growth on ricinoleic acid YNB Glucose -0.3 -0.0 0.2 0.2 0.0
ypd buoyancy 40 hrs Median Buoyancy -0.0 0.2 0.2 -0.4 0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.8 0.2 0.2 -0.8 -0.2
growth on oleic acid YNB Glucose -0.1 -0.3 0.2 0.4 0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.3 0.3 0.1 0.0 -0.4
auxotrophy Dropout Complete -0.3 -0.1 0.4 0.7 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.8 0.1 0.3 0.9 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 0.2 0.5 0.2 -0.3
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.1 0.2 0.9 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.0 -0.1 0.1 0.6 -0.0
auxotrophy YNB Glucose 75mM Arginine -0.1 0.0 0.5 1.2 -0.5
auxotrophy YNB Glucose 0.1 0.2 0.5 0.8 -0.1
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