Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_4504: 12872 - Hypothetical Protein, at 338393 to 338917 12872 mRNA_4505: 12873 - K18172 CMC2 COX assembly mitochondrial protein 2, at 338981 to 339395 12873 mRNA_4506: 12874 - KOG4754 Predicted phosphoglycerate mutase, at 339394 to 340797 12874 mRNA_4507: 12875 - K13953 adhP alcohol dehydrogenase, propanol-preferring, at 341056 to 342749 12875 mRNA_4508: 12876 - KOG2263 Methionine synthase II (cobalamin-independent), at 343058 to 345136 12876
Group Condition mRNA_4504 mRNA_4505 mRNA_4506 mRNA_4507 mRNA_4508
12872
12873
12874
12875
12876
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 0.0 -1.0 -0.4 0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 0.4 -0.8 -0.4 -0.7
growth on oleic acid YNB Oleic Acid 0.1 -0.3 -0.7 0.0 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.6 0.0 -0.5 -0.8 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 -0.1 0.0 -0.1 0.1
ypd buoyancy 40 hrs High Buoyancy 0.1 0.1 -0.4 -0.1 0.1
growth on oleic acid YNB Glucose 0.2 -0.1 -0.1 -0.3 0.2
growth on ypd YPD -0.5 0.7 -0.4 0.2 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 0.2 -0.8 0.1 0.3
growth on ricinoleic acid YNB Glucose 0.3 -0.1 -0.3 -0.0 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 0.4 -0.2 -0.2 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 -0.1 -0.0 0.2 0.5
facs on lipid accumulation Sorted High BODIPY Gate 0.2 0.6 -0.2 -0.1 -0.4
auxotrophy Dropout Complete 0.2 0.4 -0.3 -0.1 0.4
auxotrophy YNB Glucose 75mM Methionine 0.2 0.4 -0.2 -0.1 0.2
auxotrophy YNB Glucose 75mM Arginine 0.0 0.2 -0.1 0.0 0.5
ypd buoyancy 40 hrs Low Buoyancy 1.0 0.0 -0.5 0.0 0.3
auxotrophy YNB Glucose -0.3 0.6 0.1 0.2 0.5
ypd buoyancy 40 hrs Median Buoyancy 0.9 -0.0 -0.0 0.2 0.2
facs on lipid accumulation Sorted Low BODIPY Gate 0.7 0.4 0.8 0.2 0.2
facs on lipid accumulation Sorted No BODIPY Gate 1.3 0.7 0.3 0.3 0.1
remove
mRNA_4504
plot
remove
mRNA_4505
plot
remove
mRNA_4506
remove
mRNA_4507
plot
remove
mRNA_4508
plot