Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4485: 12853 - K01293 E3.4.17.4 Gly-Xaa carboxypeptidase, at 294056 to 296303 12853 mRNA_4486: 12854 - K01293 E3.4.17.4 Gly-Xaa carboxypeptidase, at 296577 to 298255 12854 mRNA_4487: 12855 - K05857 PLCD phosphatidylinositol phospholipase C, delta, at 298975 to 301181 12855 mRNA_4488: 12856 - BLAST phospholipase C [Moesziomyces antarcticus T-34], at 301518 to 302496 12856 mRNA_4489: 12857 - KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 302712 to 304024 12857
Group Condition mRNA_4485 mRNA_4486 mRNA_4487 mRNA_4488 mRNA_4489
12853
12854
12855
12856
12857
ypd buoyancy 40 hrs No Buoyancy Separation -1.0 -0.8     0.5
growth on ricinoleic acid YNB Glucose 0.3 0.1     -0.8
growth on ypd YPD -0.2 -0.1     -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.1     0.1
growth on oleic acid YNB Oleic Acid -0.2 0.1     0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.1 0.2     -0.1
auxotrophy Dropout Complete -0.1 0.2     -0.1
auxotrophy YNB Glucose 0.1 0.3     -0.4
ypd buoyancy 40 hrs High Buoyancy 0.3 -0.2     -0.1
ypd buoyancy 40 hrs Low Buoyancy 0.1 0.1     -0.2
growth on oleic acid YNB Glucose -0.2 0.3     0.0
auxotrophy YNB Glucose 75mM Methionine 0.3 0.3     -0.4
auxotrophy YNB Glucose 75mM Arginine 0.0 0.4     -0.2
growth on ricinoleic acid YNB Ricinoleic Acid 0.3 0.1     -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.3 0.3     -0.2
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 0.2     0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 0.6     0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 0.5     0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.6 0.1     0.0
facs on lipid accumulation Sorted No BODIPY Gate 0.6 0.5     0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.7 0.7     0.3
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