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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4485: 12853 - K01293 E3.4.17.4 Gly-Xaa carboxypeptidase, at 294056 to 296303
12853
mRNA_4486: 12854 - K01293 E3.4.17.4 Gly-Xaa carboxypeptidase, at 296577 to 298255
12854
mRNA_4487: 12855 - K05857 PLCD phosphatidylinositol phospholipase C, delta, at 298975 to 301181
12855
mRNA_4488: 12856 - BLAST phospholipase C [Moesziomyces antarcticus T-34], at 301518 to 302496
12856
mRNA_4489: 12857 - KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 302712 to 304024
12857
Group
Condition
mRNA_4485
mRNA_4486
mRNA_4487
mRNA_4488
mRNA_4489
12853
12854
12855
12856
12857
ypd buoyancy
40 hrs No Buoyancy Separation
-1.0
-0.8
0.5
growth on ricinoleic acid
YNB Glucose
0.3
0.1
-0.8
growth on ypd
YPD
-0.2
-0.1
-0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.0
-0.1
0.1
growth on oleic acid
YNB Oleic Acid
-0.2
0.1
0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
0.2
-0.1
auxotrophy
Dropout Complete
-0.1
0.2
-0.1
auxotrophy
YNB Glucose
0.1
0.3
-0.4
ypd buoyancy
40 hrs High Buoyancy
0.3
-0.2
-0.1
ypd buoyancy
40 hrs Low Buoyancy
0.1
0.1
-0.2
growth on oleic acid
YNB Glucose
-0.2
0.3
0.0
auxotrophy
YNB Glucose 75mM Methionine
0.3
0.3
-0.4
auxotrophy
YNB Glucose 75mM Arginine
0.0
0.4
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
0.3
0.1
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.3
0.3
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
0.1
0.2
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
0.6
0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
0.5
0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.6
0.1
0.0
facs on lipid accumulation
Sorted No BODIPY Gate
0.6
0.5
0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.7
0.7
0.3
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