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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4484: 12852 - KOG2588 Predicted DNA-binding protein, at 289880 to 293833
12852
mRNA_4485: 12853 - K01293 E3.4.17.4 Gly-Xaa carboxypeptidase, at 294056 to 296303
12853
mRNA_4486: 12854 - K01293 E3.4.17.4 Gly-Xaa carboxypeptidase, at 296577 to 298255
12854
mRNA_4487: 12855 - K05857 PLCD phosphatidylinositol phospholipase C, delta, at 298975 to 301181
12855
mRNA_4488: 12856 - BLAST phospholipase C [Moesziomyces antarcticus T-34], at 301518 to 302496
12856
Group
Condition
mRNA_4484
mRNA_4485
mRNA_4486
mRNA_4487
mRNA_4488
12852
12853
12854
12855
12856
growth on ricinoleic acid
YNB Ricinoleic Acid
-2.9
0.3
0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-2.8
0.6
0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
-1.0
-0.8
auxotrophy
YNB Glucose
-0.9
0.1
0.3
growth on ricinoleic acid
YNB Glucose
-0.8
0.3
0.1
growth on ypd
YPD
-0.1
-0.2
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.8
-0.0
0.5
ypd buoyancy
40 hrs Median Buoyancy
0.0
-0.0
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
-0.1
0.2
ypd buoyancy
40 hrs High Buoyancy
-0.1
0.3
-0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.2
0.0
0.4
growth on oleic acid
YNB Glucose
0.1
-0.2
0.3
growth on oleic acid
YNB Oleic Acid
0.3
-0.2
0.1
auxotrophy
Dropout Complete
0.2
-0.1
0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
0.3
0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.2
0.3
0.3
ypd buoyancy
40 hrs Low Buoyancy
0.3
0.1
0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
0.2
0.1
0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.3
-0.3
0.6
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
0.6
0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.2
0.7
0.7
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