Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4476: 12844 - HMMPfam-Domain of unknown function (DUF543)-PF04418, at 274456 to 275559 12844 mRNA_4477: 12845 - HMMPfam-CFEM domain-PF05730,SMART--SM00747, at 276130 to 277462 12845 mRNA_4478: 12846 - K01537 E3.6.3.8 Ca2+-transporting ATPase, at 277974 to 281759 12846 mRNA_4479: 12847 - K17290 HTATIP2 oxidoreductase, at 282366 to 283335 12847 mRNA_4480: 12848 - Hypothetical Protein, at 283832 to 284551 12848
Group Condition mRNA_4476 mRNA_4477 mRNA_4478 mRNA_4479 mRNA_4480
12844
12845
12846
12847
12848
growth on ricinoleic acid YNB Ricinoleic Acid -1.9 -0.3 0.2 -1.6 0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.5 -0.0 -0.0 -3.9 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -1.0 -0.2 -0.9 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -1.2 -0.2 0.2 -0.7 0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.0 0.3 0.2 -1.6 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 0.3 -0.3 -0.6 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 0.2 0.1 -0.9 -0.1
growth on ricinoleic acid YNB Glucose -0.6 -0.4 -0.0 0.5 0.1
growth on oleic acid YNB Oleic Acid -0.7 0.3 0.1 -0.2 0.2
growth on ypd YPD 0.4 -0.4 0.3 -0.6 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.6 0.5 -0.1 -1.2 0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.2 -0.0 -0.2 0.1 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 0.6 -0.5 -0.1 -0.0
auxotrophy YNB Glucose 75mM Methionine 0.1 0.0 0.4 -0.3 0.1
ypd buoyancy 40 hrs Low Buoyancy -0.4 0.2 0.1 0.3 0.2
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.4 0.4 0.6 0.1
auxotrophy YNB Glucose -0.3 -0.2 0.4 0.6 0.1
growth on oleic acid YNB Glucose -0.2 0.5 0.1 0.2 0.2
ypd buoyancy 40 hrs High Buoyancy 0.1 -0.4 -0.2 1.3 0.1
auxotrophy Dropout Complete 0.2 -0.3 0.3 0.7 0.1
ypd buoyancy 40 hrs Median Buoyancy 0.4 0.1 -0.0 0.8 0.2
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