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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4474: 12842 - K01426 E3.5.1.4, amiE amidase, at 268995 to 271231
12842
mRNA_4475: 12843 - K05917 CYP51 sterol 14-demethylase, at 271874 to 274192
12843
mRNA_4476: 12844 - HMMPfam-Domain of unknown function (DUF543)-PF04418, at 274456 to 275559
12844
mRNA_4477: 12845 - HMMPfam-CFEM domain-PF05730,SMART--SM00747, at 276130 to 277462
12845
mRNA_4478: 12846 - K01537 E3.6.3.8 Ca2+-transporting ATPase, at 277974 to 281759
12846
Group
Condition
mRNA_4474
mRNA_4475
mRNA_4476
mRNA_4477
mRNA_4478
12842
12843
12844
12845
12846
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-1.9
-0.3
0.2
ypd buoyancy
40 hrs No Buoyancy Separation
0.0
-0.2
-1.0
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.1
-1.2
-0.2
0.2
growth on ricinoleic acid
YNB Glucose
-0.0
-0.6
-0.4
-0.0
ypd buoyancy
40 hrs High Buoyancy
-0.0
0.1
-0.4
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
-0.2
0.3
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
0.2
-0.0
-0.2
auxotrophy
YNB Glucose 75mM Arginine
0.2
-0.2
-0.4
0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
-0.0
0.2
0.1
ypd buoyancy
40 hrs Low Buoyancy
0.1
-0.4
0.2
0.1
auxotrophy
YNB Glucose
0.1
-0.3
-0.2
0.4
growth on oleic acid
YNB Oleic Acid
0.5
-0.7
0.3
0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
0.0
0.3
0.2
growth on ypd
YPD
-0.0
0.4
-0.4
0.3
auxotrophy
Dropout Complete
0.0
0.2
-0.3
0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.1
0.5
-0.0
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.4
0.1
0.6
-0.5
growth on oleic acid
YNB Glucose
0.2
-0.2
0.5
0.1
ypd buoyancy
40 hrs Median Buoyancy
0.2
0.4
0.1
-0.0
auxotrophy
YNB Glucose 75mM Methionine
0.2
0.1
0.0
0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
0.6
0.5
-0.1
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