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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4473: 12841 - K19782 DSS1, MSU1 exoribonuclease II, mitochondrial, at 265412 to 268856
12841
mRNA_4474: 12842 - K01426 E3.5.1.4, amiE amidase, at 268995 to 271231
12842
mRNA_4475: 12843 - K05917 CYP51 sterol 14-demethylase, at 271874 to 274192
12843
mRNA_4476: 12844 - HMMPfam-Domain of unknown function (DUF543)-PF04418, at 274456 to 275559
12844
mRNA_4477: 12845 - HMMPfam-CFEM domain-PF05730,SMART--SM00747, at 276130 to 277462
12845
Group
Condition
mRNA_4473
mRNA_4474
mRNA_4475
mRNA_4476
mRNA_4477
12841
12842
12843
12844
12845
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-1.9
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.1
-1.2
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
0.0
-0.2
-1.0
growth on ricinoleic acid
YNB Glucose
-0.0
-0.6
-0.4
auxotrophy
YNB Glucose 75mM Arginine
0.2
-0.2
-0.4
ypd buoyancy
40 hrs High Buoyancy
-0.0
0.1
-0.4
auxotrophy
YNB Glucose
0.1
-0.3
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
-0.0
0.2
ypd buoyancy
40 hrs Low Buoyancy
0.1
-0.4
0.2
auxotrophy
Dropout Complete
0.0
0.2
-0.3
growth on ypd
YPD
-0.0
0.4
-0.4
growth on oleic acid
YNB Oleic Acid
0.5
-0.7
0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
0.0
0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
0.2
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
-0.2
0.3
auxotrophy
YNB Glucose 75mM Methionine
0.2
0.1
0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.1
0.5
-0.0
growth on oleic acid
YNB Glucose
0.2
-0.2
0.5
ypd buoyancy
40 hrs Median Buoyancy
0.2
0.4
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.4
0.1
0.6
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
0.6
0.5
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