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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4459: 12827 - HMMPfam-PH domain-PF00169,ProSiteProfiles-PH domain profile.-PS50003,SMART-Pleckstrin homology domain.-SM00233,SUPERFAMILY--SSF50729, at 234229 to 236969
12827
mRNA_4460: 12828 - SUPERFAMILY--SSF52047, at 237623 to 238720
12828
mRNA_4461: 12829 - SUPERFAMILY--SSF52047, at 239089 to 240569
12829
mRNA_4462: 12830 - Hypothetical Protein, at 241842 to 242730
12830
mRNA_4463: 12831 - Hypothetical Protein, at 243437 to 244042
12831
Group
Condition
mRNA_4459
mRNA_4460
mRNA_4461
mRNA_4462
mRNA_4463
12827
12828
12829
12830
12831
ypd buoyancy
40 hrs No Buoyancy Separation
0.1
-1.0
0.1
-0.1
-0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
-0.5
0.2
0.1
0.0
auxotrophy
Dropout Complete
0.4
0.0
-0.6
-0.1
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
-0.2
-0.1
0.1
0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.5
0.1
0.2
0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.6
-0.2
0.2
0.1
0.3
auxotrophy
YNB Glucose 75mM Methionine
0.3
-0.2
-0.2
0.0
-0.0
growth on ricinoleic acid
YNB Glucose
0.3
0.2
-0.1
-0.2
-0.2
auxotrophy
YNB Glucose
0.5
-0.0
-0.3
-0.0
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.5
0.5
-0.1
0.0
0.2
auxotrophy
YNB Glucose 75mM Arginine
0.5
-0.1
-0.2
0.0
-0.1
growth on ypd
YPD
0.4
0.2
-0.1
0.0
-0.3
ypd buoyancy
40 hrs High Buoyancy
-0.2
0.2
0.2
0.2
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
0.5
0.2
-0.3
-0.1
0.1
growth on oleic acid
YNB Glucose
0.3
0.2
-0.0
0.2
-0.0
ypd buoyancy
40 hrs Low Buoyancy
0.3
0.5
-0.0
0.1
-0.1
ypd buoyancy
40 hrs Median Buoyancy
0.1
0.5
0.2
0.1
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.5
0.5
-0.0
-0.0
0.1
growth on oleic acid
YNB Oleic Acid
0.4
0.4
0.2
0.3
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
0.5
0.4
0.0
0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
0.9
1.0
0.1
-0.1
0.1
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