Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4459: 12827 - HMMPfam-PH domain-PF00169,ProSiteProfiles-PH domain profile.-PS50003,SMART-Pleckstrin homology domain.-SM00233,SUPERFAMILY--SSF50729, at 234229 to 236969 12827 mRNA_4460: 12828 - SUPERFAMILY--SSF52047, at 237623 to 238720 12828 mRNA_4461: 12829 - SUPERFAMILY--SSF52047, at 239089 to 240569 12829 mRNA_4462: 12830 - Hypothetical Protein, at 241842 to 242730 12830 mRNA_4463: 12831 - Hypothetical Protein, at 243437 to 244042 12831
Group Condition mRNA_4459 mRNA_4460 mRNA_4461 mRNA_4462 mRNA_4463
12827
12828
12829
12830
12831
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 -1.0 0.1 -0.1 -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.5 0.2 0.1 0.0
auxotrophy Dropout Complete 0.4 0.0 -0.6 -0.1 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.2 -0.1 0.1 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.5 0.1 0.2 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.6 -0.2 0.2 0.1 0.3
auxotrophy YNB Glucose 75mM Methionine 0.3 -0.2 -0.2 0.0 -0.0
growth on ricinoleic acid YNB Glucose 0.3 0.2 -0.1 -0.2 -0.2
auxotrophy YNB Glucose 0.5 -0.0 -0.3 -0.0 -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.5 0.5 -0.1 0.0 0.2
auxotrophy YNB Glucose 75mM Arginine 0.5 -0.1 -0.2 0.0 -0.1
growth on ypd YPD 0.4 0.2 -0.1 0.0 -0.3
ypd buoyancy 40 hrs High Buoyancy -0.2 0.2 0.2 0.2 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid 0.5 0.2 -0.3 -0.1 0.1
growth on oleic acid YNB Glucose 0.3 0.2 -0.0 0.2 -0.0
ypd buoyancy 40 hrs Low Buoyancy 0.3 0.5 -0.0 0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy 0.1 0.5 0.2 0.1 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.5 0.5 -0.0 -0.0 0.1
growth on oleic acid YNB Oleic Acid 0.4 0.4 0.2 0.3 -0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.1 0.5 0.4 0.0 0.2
facs on lipid accumulation Sorted Low BODIPY Gate 0.9 1.0 0.1 -0.1 0.1
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