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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4453: 12821 - KOG3855 Monooxygenase involved in coenzyme Q (ubiquinone) biosynthesis, at 218886 to 222303
12821
mRNA_4454: 12822 - K03380 E1.14.13.7 phenol 2-monooxygenase, at 223173 to 226550
12822
mRNA_4455: 12823 - K08489 STX16 syntaxin 16, at 226736 to 228552
12823
mRNA_4456: 12824 - BLAST C-x8-C-x5-C-x3-H type zinc finger protein [Nanniz..., at 228673 to 230476
12824
mRNA_4457: 12825 - K14709 SLC39A1_2_3, ZIP1_2_3 solute carrier family 39 (zinc transporter), member 1/2/3, at 231158 to 232825
12825
Group
Condition
mRNA_4453
mRNA_4454
mRNA_4455
mRNA_4456
mRNA_4457
12821
12822
12823
12824
12825
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
0.0
-0.4
-0.1
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
0.0
-0.0
-0.5
0.2
-0.3
growth on ricinoleic acid
YNB Glucose
-0.0
-0.2
-0.1
0.1
-0.4
growth on oleic acid
YNB Glucose
0.1
-0.0
0.2
-0.2
-0.5
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.1
0.0
-0.1
-0.1
growth on oleic acid
YNB Oleic Acid
0.1
0.2
0.1
-0.2
-0.5
auxotrophy
YNB Glucose
0.3
-0.2
-0.1
0.1
-0.3
ypd buoyancy
40 hrs Median Buoyancy
0.0
0.1
0.0
-0.2
0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
0.1
0.2
-0.1
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-0.0
-0.2
0.4
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
0.2
-0.2
-0.0
0.2
auxotrophy
YNB Glucose 75mM Methionine
0.3
-0.3
0.1
-0.2
0.0
ypd buoyancy
40 hrs High Buoyancy
0.1
0.1
0.1
0.0
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.2
0.1
-0.0
-0.3
0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.3
0.1
-0.0
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
0.2
-0.1
0.1
0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
0.1
0.0
-0.3
0.3
0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
0.2
0.3
-0.1
0.1
auxotrophy
Dropout Complete
0.2
0.1
0.3
-0.0
-0.0
auxotrophy
YNB Glucose 75mM Arginine
0.3
0.0
0.3
-0.2
0.2
growth on ypd
YPD
-0.1
0.2
0.5
-0.0
0.4
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