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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4449: 12817 - K14168 CTU1, NCS6 cytoplasmic tRNA 2-thiolation protein 1, at 210344 to 212336
12817
mRNA_4450: 12818 - Hypothetical Protein, at 212523 to 213518
12818
mRNA_4451: 12819 - K03355 APC8, CDC23 anaphase-promoting complex subunit 8, at 214508 to 216794
12819
mRNA_4452: 12820 - K13955 yogA zinc-binding alcohol dehydrogenase/oxidoreductase, at 217165 to 218716
12820
mRNA_4453: 12821 - KOG3855 Monooxygenase involved in coenzyme Q (ubiquinone) biosynthesis, at 218886 to 222303
12821
Group
Condition
mRNA_4449
mRNA_4450
mRNA_4451
mRNA_4452
mRNA_4453
12817
12818
12819
12820
12821
facs on lipid accumulation
Sorted High BODIPY Gate
-1.3
-0.6
-0.6
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-2.6
0.0
0.2
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
-0.2
-0.8
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.6
0.0
-0.6
0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.8
-0.4
0.1
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-0.6
-0.2
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
-0.3
-0.2
-0.1
growth on ricinoleic acid
YNB Glucose
0.0
-0.6
0.2
-0.0
growth on ypd
YPD
0.1
-0.2
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
0.1
-0.2
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.5
0.4
-0.0
0.0
ypd buoyancy
40 hrs High Buoyancy
0.5
-0.0
-0.1
0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.1
0.2
-0.1
0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
0.5
0.3
0.1
0.2
auxotrophy
YNB Glucose 75mM Methionine
0.3
0.4
-0.0
0.3
auxotrophy
Dropout Complete
0.4
0.5
0.0
0.2
auxotrophy
YNB Glucose
0.4
0.2
0.4
0.3
growth on oleic acid
YNB Glucose
0.6
0.7
0.0
0.1
auxotrophy
YNB Glucose 75mM Arginine
0.6
0.4
0.4
0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
1.3
0.4
-0.1
0.1
growth on oleic acid
YNB Oleic Acid
0.9
0.6
0.3
0.1
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