Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4446: 12814 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 200196 to 203838 12814 mRNA_4447: 12815 - K12666 OST1, RPN1 oligosaccharyltransferase complex subunit alpha (ribophorin I), at 204059 to 206130 12815 mRNA_4448: 12816 - KOG3979 FGF receptor activating protein 1, at 206220 to 210253 12816 mRNA_4449: 12817 - K14168 CTU1, NCS6 cytoplasmic tRNA 2-thiolation protein 1, at 210344 to 212336 12817 mRNA_4450: 12818 - Hypothetical Protein, at 212523 to 213518 12818
Group Condition mRNA_4446 mRNA_4447 mRNA_4448 mRNA_4449 mRNA_4450
12814
12815
12816
12817
12818
ypd buoyancy 40 hrs Low Buoyancy 0.1   -0.2 -2.6 0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.3   -0.3 -1.3 -0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0   -0.0 -0.8 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation -0.4   -0.1 -0.4 -0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.1   -0.6 -0.6 0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1   -0.1 -0.3 -0.3
growth on ricinoleic acid YNB Glucose -0.1   -0.0 0.0 -0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0   0.1 -0.1 -0.6
ypd buoyancy 40 hrs Median Buoyancy -0.1   0.0 -0.5 0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1   -0.1 -0.1 0.1
ypd buoyancy 40 hrs High Buoyancy -0.2   0.0 0.5 -0.0
growth on ypd YPD 0.2   0.2 0.1 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1   -0.0 0.1 0.2
auxotrophy YNB Glucose 0.1   -0.1 0.4 0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.1   -0.1 0.5 0.3
auxotrophy YNB Glucose 75mM Methionine 0.1   -0.1 0.3 0.4
auxotrophy Dropout Complete -0.0   0.0 0.4 0.5
auxotrophy YNB Glucose 75mM Arginine 0.2   -0.0 0.6 0.4
facs on lipid accumulation Sorted Low BODIPY Gate 0.2   -0.3 1.3 0.4
growth on oleic acid YNB Glucose 0.2   0.2 0.6 0.7
growth on oleic acid YNB Oleic Acid 0.1   0.1 0.9 0.6
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