Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4444: 12812 - K14327 UPF2, RENT2 regulator of nonsense transcripts 2, at 192808 to 197198 12812 mRNA_4445: 12813 - K16342 PLA2G4, CPLA2 cytosolic phospholipase A2, at 197325 to 199939 12813 mRNA_4446: 12814 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 200196 to 203838 12814 mRNA_4447: 12815 - K12666 OST1, RPN1 oligosaccharyltransferase complex subunit alpha (ribophorin I), at 204059 to 206130 12815 mRNA_4448: 12816 - KOG3979 FGF receptor activating protein 1, at 206220 to 210253 12816
Group Condition mRNA_4444 mRNA_4445 mRNA_4446 mRNA_4447 mRNA_4448
12812
12813
12814
12815
12816
facs on lipid accumulation Sorted High BODIPY Gate   -0.0 -0.3   -0.3
ypd buoyancy 40 hrs No Buoyancy Separation   -0.1 -0.4   -0.1
facs on lipid accumulation Sorted No BODIPY Gate   -0.1 0.1   -0.6
growth on ricinoleic acid YNB Ricinoleic Acid   -0.1 -0.1   -0.1
ypd buoyancy 40 hrs Low Buoyancy   -0.2 0.1   -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.0 -0.1   -0.1
facs on lipid accumulation Sorted Low BODIPY Gate   -0.0 0.2   -0.3
ypd buoyancy 40 hrs Median Buoyancy   -0.0 -0.1   0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy   -0.1 -0.0   0.1
growth on ricinoleic acid YNB Glucose   0.1 -0.1   -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.0 -0.0   -0.0
ypd buoyancy 40 hrs High Buoyancy   0.1 -0.2   0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.0 0.1   -0.1
auxotrophy Dropout Complete   0.2 -0.0   0.0
growth on ricinoleic acid YNB Methylricinoleic Acid   0.2 0.1   -0.0
auxotrophy YNB Glucose 75mM Methionine   0.3 0.1   -0.1
auxotrophy YNB Glucose   0.4 0.1   -0.1
auxotrophy YNB Glucose 75mM Arginine   0.2 0.2   -0.0
growth on oleic acid YNB Oleic Acid   0.3 0.1   0.1
growth on oleic acid YNB Glucose   0.2 0.2   0.2
growth on ypd YPD   0.2 0.2   0.2
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