Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4442: 12810 - SUPERFAMILY--SSF52047, at 188576 to 190157 12810 mRNA_4443: 12811 - SUPERFAMILY--SSF52047, at 190783 to 192210 12811 mRNA_4444: 12812 - K14327 UPF2, RENT2 regulator of nonsense transcripts 2, at 192808 to 197198 12812 mRNA_4445: 12813 - K16342 PLA2G4, CPLA2 cytosolic phospholipase A2, at 197325 to 199939 12813 mRNA_4446: 12814 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 200196 to 203838 12814
Group Condition mRNA_4442 mRNA_4443 mRNA_4444 mRNA_4445 mRNA_4446
12810
12811
12812
12813
12814
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 -1.1   -0.1 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5 -0.3   0.0 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 -0.4   0.0 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.3   0.0 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.0   -0.1 -0.0
growth on ypd YPD -0.1 -0.3   0.2 0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 0.3   -0.1 -0.1
growth on ricinoleic acid YNB Glucose -0.0 0.1   0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy 0.1 0.0   -0.0 -0.1
ypd buoyancy 40 hrs High Buoyancy 0.3 -0.1   0.1 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 0.0   0.2 0.1
ypd buoyancy 40 hrs Low Buoyancy 0.2 0.2   -0.2 0.1
auxotrophy Dropout Complete 0.2 0.2   0.2 -0.0
auxotrophy YNB Glucose 75mM Arginine 0.0 0.0   0.2 0.2
auxotrophy YNB Glucose 75mM Methionine 0.0 0.1   0.3 0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.3 0.2   -0.1 0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.5 0.4   -0.0 -0.3
growth on oleic acid YNB Glucose 0.1 0.2   0.2 0.2
auxotrophy YNB Glucose 0.2 0.1   0.4 0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.3 0.2   -0.0 0.2
growth on oleic acid YNB Oleic Acid 0.1 0.4   0.3 0.1
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