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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4436: 12804 - Hypothetical Protein, at 178306 to 178939
12804
mRNA_4437: 12805 - KOG4629 Predicted mechanosensitive ion channel, at 179176 to 181994
12805
mRNA_4438: 12806 - Hypothetical Protein, at 182518 to 183149
12806
mRNA_4439: 12807 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 183343 to 183707
12807
mRNA_4440: 12808 - KOG2439 Nuclear architecture related protein, at 183991 to 186593
12808
Group
Condition
mRNA_4436
mRNA_4437
mRNA_4438
mRNA_4439
mRNA_4440
12804
12805
12806
12807
12808
auxotrophy
YNB Glucose 75mM Arginine
-0.0
-1.1
-0.1
-0.3
auxotrophy
YNB Glucose 75mM Methionine
0.3
-0.9
-0.1
-0.7
auxotrophy
YNB Glucose
0.1
-0.7
0.0
-0.8
ypd buoyancy
40 hrs No Buoyancy Separation
0.2
-0.5
-0.8
-0.1
growth on oleic acid
YNB Glucose
-0.4
-0.9
-0.0
0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.1
-0.5
0.4
-1.1
growth on ricinoleic acid
YNB Glucose
0.4
-0.6
-0.1
-0.3
growth on oleic acid
YNB Oleic Acid
-0.3
-0.1
0.1
-0.2
growth on ypd
YPD
0.3
0.1
-0.3
-0.5
ypd buoyancy
40 hrs Low Buoyancy
0.0
-0.3
0.2
-0.2
auxotrophy
Dropout Complete
0.6
-0.7
-0.1
0.0
ypd buoyancy
40 hrs High Buoyancy
0.1
-0.3
0.1
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.2
-0.1
0.3
-0.2
ypd buoyancy
40 hrs Median Buoyancy
0.3
-0.1
0.0
0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.1
0.8
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.8
0.1
0.4
-0.8
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.0
0.2
0.5
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
-0.0
0.1
0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
0.3
-0.2
-0.0
0.7
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
0.1
0.3
0.6
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.3
0.3
0.4
0.3
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