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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4423: 12791 - K09528 DNAJC8 DnaJ homolog subfamily C member 8, at 150001 to 151135
12791
mRNA_4424: 12792 - KOG3860 Acyltransferase required for palmitoylation of Hedgehog (Hh) family of secreted signaling proteins, at 151250 to 153858
12792
mRNA_4425: 12793 - KOG3844 Predicted component of NuA3 histone acetyltransferase complex, at 153897 to 156025
12793
mRNA_4426: 12794 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 156367 to 159071
12794
mRNA_4427: 12795 - K11539 CBR4 carbonyl reductase 4, at 160068 to 161346
12795
Group
Condition
mRNA_4423
mRNA_4424
mRNA_4425
mRNA_4426
mRNA_4427
12791
12792
12793
12794
12795
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.5
-0.3
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.5
-0.3
-0.2
growth on ricinoleic acid
YNB Glucose
-0.3
-0.4
-0.4
ypd buoyancy
40 hrs No Buoyancy Separation
-0.9
-0.1
0.0
ypd buoyancy
40 hrs High Buoyancy
0.1
-0.1
-0.5
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.1
-0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.1
0.0
-0.2
auxotrophy
Dropout Complete
-0.2
0.1
-0.2
auxotrophy
YNB Glucose
-0.1
0.1
-0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.2
0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
-0.1
0.1
growth on ypd
YPD
-0.1
0.2
-0.2
growth on oleic acid
YNB Oleic Acid
0.0
0.2
-0.2
ypd buoyancy
40 hrs Median Buoyancy
0.1
0.1
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-0.2
0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
-0.1
0.3
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
-0.1
0.3
growth on oleic acid
YNB Glucose
-0.1
0.4
0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
-0.1
0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.4
0.1
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.3
0.1
0.4
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