Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4415: 12783 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 131419 to 134157 12783 mRNA_4416: 12784 - K00002 AKR1A1, adh alcohol dehydrogenase (NADP+), at 134508 to 136011 12784 mRNA_4417: 12785 - Hypothetical Protein, at 136437 to 137903 12785 mRNA_4418: 12786 - KOG3683 Uncharacterized conserved protein, at 138075 to 139542 12786 mRNA_4419: 12787 - K11121 SIR2 NAD-dependent histone deacetylase SIR2, at 139865 to 142182 12787
Group Condition mRNA_4415 mRNA_4416 mRNA_4417 mRNA_4418 mRNA_4419
12783
12784
12785
12786
12787
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.0 -0.1 -0.4 -1.8
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.4 -0.4 0.1 -1.7
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.3 -0.3 -0.0 -1.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.0 -0.3 -1.3 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.5 -1.0 -0.3 0.8
auxotrophy Dropout Complete -0.0 -0.4 -0.1 0.0 -0.6
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.3 -0.2 0.1 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.0 0.1 -0.4 -0.5 0.3
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.2 -0.2 0.3 -0.2
auxotrophy YNB Glucose 0.1 -0.5 -0.2 0.2 0.0
growth on ricinoleic acid YNB Glucose -0.2 -0.4 -0.4 -0.2 0.8
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.1 -1.0 0.1 1.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.0 0.1 -0.1 -0.3 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3 0.1 -0.2 -0.1 0.1
growth on ypd YPD 0.0 -0.0 -0.0 -0.4 0.6
ypd buoyancy 40 hrs High Buoyancy 0.1 -0.0 0.1 0.0 0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.2 0.3 -0.3 0.7
ypd buoyancy 40 hrs Median Buoyancy 0.1 -0.0 0.2 0.2 0.2
growth on oleic acid YNB Oleic Acid -0.1 0.1 -0.1 0.6 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 0.2 -0.1 0.4 0.1
growth on oleic acid YNB Glucose 0.1 0.2 -0.3 0.3 0.4
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