Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4410: 12778 - K00877 THI20 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase / thiaminase, at 115129 to 117248 12778 mRNA_4411: 12779 - K14790 NOP9 nucleolar protein 9, at 117633 to 120365 12779 mRNA_4412: 12780 - SUPERFAMILY--SSF52047, at 120442 to 126387 12780 mRNA_4413: 12781 - KOG0252 Inorganic phosphate transporter, at 126520 to 129077 12781 mRNA_4414: 12782 - BLAST DiGeorge syndrome critical region 6 (DGCR6) protein [..., at 129803 to 130566 12782
Group Condition mRNA_4410 mRNA_4411 mRNA_4412 mRNA_4413 mRNA_4414
12778
12779
12780
12781
12782
growth on ypd YPD 0.0   0.1 -0.2 -0.6
growth on ricinoleic acid YNB Glucose 0.0   0.1 -0.2 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.1   0.1 -0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy 0.2   0.0 -0.1 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0   0.0 -0.1 0.1
ypd buoyancy 40 hrs Median Buoyancy 0.2   0.2 0.1 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation 0.3   0.1 -0.0 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.1   0.1 0.2 0.2
auxotrophy YNB Glucose -0.2   0.1 0.1 0.3
growth on oleic acid YNB Glucose 0.2   0.1 0.3 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.0   -0.1 0.0 0.6
ypd buoyancy 40 hrs High Buoyancy 0.2   0.1 0.0 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2   0.1 -0.3 0.4
facs on lipid accumulation Sorted No BODIPY Gate 0.3   0.1 -0.1 0.3
auxotrophy Dropout Complete -0.1   0.0 -0.0 0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.4   0.1 -0.3 0.4
auxotrophy YNB Glucose 75mM Arginine 0.2   0.0 -0.1 0.5
facs on lipid accumulation Sorted Low BODIPY Gate 0.3   -0.2 0.3 0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3   0.2 -0.3 0.6
growth on oleic acid YNB Oleic Acid 0.4   0.1 0.3 0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.3   0.1 -0.3 0.8
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