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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4395: 12763 - HMMPfam-RTA1 like protein-PF04479, at 88066 to 89251
12763
mRNA_4396: 12764 - BLAST NAD(P)-dependent alcohol dehydrogenase [Mycena chloro..., at 89473 to 89864
12764
mRNA_4397: 12765 - HMMPfam-Alcohol dehydrogenase GroES-like domain-PF08240,SUPERFAMILY--SSF50129, at 90015 to 90968
12765
mRNA_4398: 12766 - HMMPfam-Acetyltransferase (GNAT) family-PF00583,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729, at 91356 to 92891
12766
mRNA_4399: 12767 - HMMPfam-CFEM domain-PF05730, at 93703 to 94660
12767
Group
Condition
mRNA_4395
mRNA_4396
mRNA_4397
mRNA_4398
mRNA_4399
12763
12764
12765
12766
12767
facs on lipid accumulation
Sorted High BODIPY Gate
-1.2
0.1
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.7
0.2
0.0
growth on oleic acid
YNB Oleic Acid
0.2
-0.4
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.9
0.1
0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.5
-0.2
0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.6
0.0
0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.6
0.5
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
0.4
0.2
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
0.3
-0.1
growth on ricinoleic acid
YNB Glucose
0.5
-0.3
0.2
growth on oleic acid
YNB Glucose
1.3
-0.7
-0.0
growth on ypd
YPD
-0.0
-0.1
0.8
ypd buoyancy
40 hrs High Buoyancy
0.3
0.4
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.7
-0.2
0.2
auxotrophy
YNB Glucose 75mM Arginine
1.1
-0.2
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.2
0.8
0.3
auxotrophy
YNB Glucose 75mM Methionine
0.7
0.2
0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.8
0.0
0.1
auxotrophy
Dropout Complete
1.2
-0.3
0.1
ypd buoyancy
40 hrs Median Buoyancy
0.5
0.5
0.3
auxotrophy
YNB Glucose
1.3
0.1
0.0
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