Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
500 nt
mRNA_4393: 12761 - K00029 E1.1.1.40, maeB malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+), at 82282 to 84844
12761
mRNA_4394: 12762 - ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701, at 85046 to 87560
12762
mRNA_4395: 12763 - HMMPfam-RTA1 like protein-PF04479, at 88066 to 89251
12763
mRNA_4396: 12764 - BLAST NAD(P)-dependent alcohol dehydrogenase [Mycena chloro..., at 89473 to 89864
12764
mRNA_4397: 12765 - HMMPfam-Alcohol dehydrogenase GroES-like domain-PF08240,SUPERFAMILY--SSF50129, at 90015 to 90968
12765
Group
Condition
mRNA_4393
mRNA_4394
mRNA_4395
mRNA_4396
mRNA_4397
12761
12762
12763
12764
12765
facs on lipid accumulation
Sorted High BODIPY Gate
0.2
-0.3
-1.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.4
-0.2
-0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.7
0.3
-0.6
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
0.3
-0.9
ypd buoyancy
40 hrs No Buoyancy Separation
0.1
-0.2
-0.6
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
0.1
-0.7
growth on oleic acid
YNB Oleic Acid
-0.5
0.1
0.2
growth on ypd
YPD
0.2
-0.3
-0.0
ypd buoyancy
40 hrs Low Buoyancy
0.1
0.2
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
0.2
-0.5
0.4
ypd buoyancy
40 hrs High Buoyancy
0.3
-0.1
0.3
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
0.1
0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.3
0.4
0.7
growth on ricinoleic acid
YNB Glucose
0.1
0.2
0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.1
0.1
0.7
ypd buoyancy
40 hrs Median Buoyancy
0.5
-0.1
0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
0.3
-0.1
0.8
auxotrophy
YNB Glucose 75mM Arginine
-0.0
0.0
1.1
auxotrophy
Dropout Complete
-0.1
0.3
1.2
growth on oleic acid
YNB Glucose
0.1
0.2
1.3
auxotrophy
YNB Glucose
-0.1
0.6
1.3
remove
mRNA_4393
plot
remove
mRNA_4394
plot
remove
mRNA_4395
remove
mRNA_4396
plot
remove
mRNA_4397
plot