Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4392: 12760 - KOG3069 Peroxisomal NUDIX hydrolase, at 80185 to 81389 12760 mRNA_4393: 12761 - K00029 E1.1.1.40, maeB malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+), at 82282 to 84844 12761 mRNA_4394: 12762 - ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701, at 85046 to 87560 12762 mRNA_4395: 12763 - HMMPfam-RTA1 like protein-PF04479, at 88066 to 89251 12763 mRNA_4396: 12764 - BLAST NAD(P)-dependent alcohol dehydrogenase [Mycena chloro..., at 89473 to 89864 12764
Group Condition mRNA_4392 mRNA_4393 mRNA_4394 mRNA_4395 mRNA_4396
12760
12761
12762
12763
12764
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 0.1 -0.2 -0.6  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2 -0.7 0.3 -0.6  
facs on lipid accumulation Sorted High BODIPY Gate 0.9 0.2 -0.3 -1.2  
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 0.2 -0.5 0.4  
growth on oleic acid YNB Oleic Acid -0.0 -0.5 0.1 0.2  
buoyancy on lipid accumulation 40 hrs Low Buoyancy 1.0 -0.4 -0.2 -0.5  
growth on ypd YPD 0.3 0.2 -0.3 -0.0  
ypd buoyancy 40 hrs Low Buoyancy 0.3 0.1 0.2 -0.2  
facs on lipid accumulation Sorted No BODIPY Gate -0.2 0.2 0.1 0.2  
buoyancy on lipid accumulation 40 hrs Median Buoyancy 1.3 -0.3 0.3 -0.9  
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.3 0.4 0.7  
buoyancy on lipid accumulation 40 hrs High Buoyancy 1.2 -0.1 0.1 -0.7  
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.5 -0.1 0.5  
ypd buoyancy 40 hrs High Buoyancy 0.5 0.3 -0.1 0.3  
growth on ricinoleic acid YNB Glucose 0.1 0.1 0.2 0.5  
auxotrophy YNB Glucose 75mM Arginine 0.0 -0.0 0.0 1.1  
auxotrophy Dropout Complete -0.1 -0.1 0.3 1.2  
growth on ricinoleic acid YNB Methylricinoleic Acid 0.4 0.1 0.1 0.7  
growth on ricinoleic acid YNB Ricinoleic Acid 0.6 0.3 -0.1 0.8  
auxotrophy YNB Glucose -0.0 -0.1 0.6 1.3  
growth on oleic acid YNB Glucose 0.5 0.1 0.2 1.3  
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