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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4391: 12759 - Hypothetical Protein, at 79565 to 80188
12759
mRNA_4392: 12760 - KOG3069 Peroxisomal NUDIX hydrolase, at 80185 to 81389
12760
mRNA_4393: 12761 - K00029 E1.1.1.40, maeB malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+), at 82282 to 84844
12761
mRNA_4394: 12762 - ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701, at 85046 to 87560
12762
mRNA_4395: 12763 - HMMPfam-RTA1 like protein-PF04479, at 88066 to 89251
12763
Group
Condition
mRNA_4391
mRNA_4392
mRNA_4393
mRNA_4394
mRNA_4395
12759
12760
12761
12762
12763
ypd buoyancy
40 hrs No Buoyancy Separation
-0.7
-0.7
0.1
-0.2
-0.6
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.5
0.2
-0.7
0.3
-0.6
facs on lipid accumulation
Sorted High BODIPY Gate
-0.8
0.9
0.2
-0.3
-1.2
growth on oleic acid
YNB Oleic Acid
0.3
-0.0
-0.5
0.1
0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.0
1.0
-0.4
-0.2
-0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
1.2
-0.1
0.1
-0.7
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
1.3
-0.3
0.3
-0.9
ypd buoyancy
40 hrs High Buoyancy
-0.5
0.5
0.3
-0.1
0.3
ypd buoyancy
40 hrs Low Buoyancy
0.2
0.3
0.1
0.2
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
0.8
-0.4
0.2
-0.5
0.4
auxotrophy
YNB Glucose 75mM Methionine
0.0
-0.3
-0.3
0.4
0.7
growth on ricinoleic acid
YNB Glucose
-0.3
0.1
0.1
0.2
0.5
facs on lipid accumulation
Sorted No BODIPY Gate
0.4
-0.2
0.2
0.1
0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.6
0.4
0.1
0.1
0.7
growth on ypd
YPD
0.8
0.3
0.2
-0.3
-0.0
ypd buoyancy
40 hrs Median Buoyancy
0.1
-0.1
0.5
-0.1
0.5
auxotrophy
Dropout Complete
0.2
-0.1
-0.1
0.3
1.2
auxotrophy
YNB Glucose 75mM Arginine
0.4
0.0
-0.0
0.0
1.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.2
0.6
0.3
-0.1
0.8
auxotrophy
YNB Glucose
0.1
-0.0
-0.1
0.6
1.3
growth on oleic acid
YNB Glucose
0.1
0.5
0.1
0.2
1.3
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