Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4391: 12759 - Hypothetical Protein, at 79565 to 80188 12759 mRNA_4392: 12760 - KOG3069 Peroxisomal NUDIX hydrolase, at 80185 to 81389 12760 mRNA_4393: 12761 - K00029 E1.1.1.40, maeB malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+), at 82282 to 84844 12761 mRNA_4394: 12762 - ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701, at 85046 to 87560 12762 mRNA_4395: 12763 - HMMPfam-RTA1 like protein-PF04479, at 88066 to 89251 12763
Group Condition mRNA_4391 mRNA_4392 mRNA_4393 mRNA_4394 mRNA_4395
12759
12760
12761
12762
12763
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 -0.7 0.1 -0.2 -0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 0.2 -0.7 0.3 -0.6
facs on lipid accumulation Sorted High BODIPY Gate -0.8 0.9 0.2 -0.3 -1.2
growth on oleic acid YNB Oleic Acid 0.3 -0.0 -0.5 0.1 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.0 1.0 -0.4 -0.2 -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 1.2 -0.1 0.1 -0.7
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 1.3 -0.3 0.3 -0.9
ypd buoyancy 40 hrs High Buoyancy -0.5 0.5 0.3 -0.1 0.3
ypd buoyancy 40 hrs Low Buoyancy 0.2 0.3 0.1 0.2 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate 0.8 -0.4 0.2 -0.5 0.4
auxotrophy YNB Glucose 75mM Methionine 0.0 -0.3 -0.3 0.4 0.7
growth on ricinoleic acid YNB Glucose -0.3 0.1 0.1 0.2 0.5
facs on lipid accumulation Sorted No BODIPY Gate 0.4 -0.2 0.2 0.1 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6 0.4 0.1 0.1 0.7
growth on ypd YPD 0.8 0.3 0.2 -0.3 -0.0
ypd buoyancy 40 hrs Median Buoyancy 0.1 -0.1 0.5 -0.1 0.5
auxotrophy Dropout Complete 0.2 -0.1 -0.1 0.3 1.2
auxotrophy YNB Glucose 75mM Arginine 0.4 0.0 -0.0 0.0 1.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 0.6 0.3 -0.1 0.8
auxotrophy YNB Glucose 0.1 -0.0 -0.1 0.6 1.3
growth on oleic acid YNB Glucose 0.1 0.5 0.1 0.2 1.3
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