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Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4389: 12757 - K10735 GINS4, SLD5 GINS complex subunit 4, at 74390 to 75580
12757
mRNA_4390: 12758 - K16261 YAT yeast amino acid transporter, at 76292 to 78680
12758
mRNA_4391: 12759 - Hypothetical Protein, at 79565 to 80188
12759
mRNA_4392: 12760 - KOG3069 Peroxisomal NUDIX hydrolase, at 80185 to 81389
12760
mRNA_4393: 12761 - K00029 E1.1.1.40, maeB malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+), at 82282 to 84844
12761
Group
Condition
mRNA_4389
mRNA_4390
mRNA_4391
mRNA_4392
mRNA_4393
12757
12758
12759
12760
12761
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
-0.7
-0.7
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.6
-0.5
0.2
-0.7
auxotrophy
YNB Glucose 75mM Methionine
0.2
0.0
-0.3
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
-0.8
0.9
0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.5
0.4
-0.2
0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.6
0.8
-0.4
0.2
auxotrophy
Dropout Complete
0.1
0.2
-0.1
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.0
-0.5
0.5
0.3
auxotrophy
YNB Glucose
0.3
0.1
-0.0
-0.1
growth on ricinoleic acid
YNB Glucose
0.3
-0.3
0.1
0.1
growth on oleic acid
YNB Oleic Acid
0.7
0.3
-0.0
-0.5
ypd buoyancy
40 hrs Median Buoyancy
0.1
0.1
-0.1
0.5
auxotrophy
YNB Glucose 75mM Arginine
0.2
0.4
0.0
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.8
-0.6
0.4
0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
0.0
1.0
-0.4
ypd buoyancy
40 hrs Low Buoyancy
0.4
0.2
0.3
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.3
-0.3
1.2
-0.1
growth on oleic acid
YNB Glucose
0.5
0.1
0.5
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.8
-0.1
1.3
-0.3
growth on ypd
YPD
0.8
0.8
0.3
0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
1.1
0.2
0.6
0.3
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