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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4385: 12753 - HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713, at 68273 to 69417
12753
mRNA_4386: 12754 - BLAST polysaccharide lyase family 14 protein [Hypholoma sub..., at 70020 to 71335
12754
mRNA_4387: 12755 - HMMPfam-Ctf8-PF09696, at 71691 to 72315
12755
mRNA_4388: 12756 - KOG2084 Predicted histone tail methylase containing SET domain, at 72775 to 74031
12756
mRNA_4389: 12757 - K10735 GINS4, SLD5 GINS complex subunit 4, at 74390 to 75580
12757
Group
Condition
mRNA_4385
mRNA_4386
mRNA_4387
mRNA_4388
mRNA_4389
12753
12754
12755
12756
12757
facs on lipid accumulation
Sorted Low BODIPY Gate
0.5
0.4
-2.5
-0.7
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.0
-0.3
-0.6
-1.0
auxotrophy
Dropout Complete
0.2
-0.5
-0.5
-0.9
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.1
-0.1
-0.9
-0.5
growth on ricinoleic acid
YNB Glucose
0.2
-0.1
-0.9
-0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.5
-0.3
-0.6
-0.9
auxotrophy
YNB Glucose 75mM Methionine
0.1
-0.3
-0.0
-0.9
auxotrophy
YNB Glucose
0.1
-0.4
-0.3
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
0.8
0.3
-1.5
-0.3
growth on ypd
YPD
-0.1
-0.1
-0.5
0.0
auxotrophy
YNB Glucose 75mM Arginine
0.1
-0.3
-0.2
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.6
-0.8
-0.2
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.4
0.4
-0.8
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
0.2
0.3
-0.8
-0.1
growth on oleic acid
YNB Oleic Acid
-0.2
-0.1
-0.1
0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.4
-0.1
-0.1
-0.2
growth on oleic acid
YNB Glucose
0.3
-0.3
0.0
0.1
ypd buoyancy
40 hrs Median Buoyancy
0.3
-0.3
0.7
-0.2
ypd buoyancy
40 hrs Low Buoyancy
0.1
-0.0
1.0
-0.4
ypd buoyancy
40 hrs High Buoyancy
0.3
-0.2
0.7
0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
0.2
1.5
0.9
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